Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2244 ATGCCTTCTTGCAACGTGAGAGATATGGAGGGTAGAATTGGAGGTGCATATGAAGGTGGGATCAGAGAAAATGATGTAGAGAAACACAGTGATGATGATGAGGCTCTAAAGAAGATGATTTCAAGCCATCCTCTTTATGGCCTTCTGATTGAATCTCACTTCAACTGTTTGAAGGTGGGTTTAGATGAATTTGGAGAGTTTGATATACCAAATAATGCATGGAAGCGGATGGCCAATGCCGAGCTCAAAGCAGTAACAGCAACTCCGAGTTCTTCAGAACTTGATCACTTCATGGAAGCATACTGCATGGCACTAAGCAACCTGAAAGAAGCCATAGAGGAACCAACAAGAGAAACAAGGGCATTCATAAATTCGATGCATGTGCAGCTGAAGGAACTCAGCAAACCGAGTAATAATGAGCCACGATATGATTCTATGGAGTGCAACAGCAAGAAGAATCTTTGA 465 0.4237 MPSCNVRDMEGRIGGAYEGGIRENDVEKHSDDDEALKKMISSHPLYGLLIESHFNCLKVGLDEFGEFDIPNNAWKRMANAELKAVTATPSSSELDHFMEAYCMALSNLKEAIEEPTRETRAFINSMHVQLKELSKPSNNEPRYDSMECNSKKNL 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2244 154 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 20 137 - -
Dere09g2244 154 MobiDBLite consensus disorder prediction 134 154 - -
Dere09g2244 154 SMART KNOX1_2 34 81 IPR005540 GO:0003677|GO:0005634
Dere09g2244 154 SMART KNOX2_2 84 135 IPR005541 GO:0003677|GO:0005634
Dere09g2244 154 Pfam KNOX2 domain 92 133 IPR005541 GO:0003677|GO:0005634
Dere09g2244 154 Pfam KNOX1 domain 36 60 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2244 Dere-ChrDere09 32607310 32608473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2244 32 133 Homeobox Transcription Factor Family AT4G08150 31.731 1.14e-11 59.7