Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2236 ATGACGATTAGATCGAGCAGATTGAAACGGAAGCTTGAACCGGAACCACCTCCTTGCATCATGAAGAAGCTCCGGTCTAAGCTACTTCGCCGGAGAAGATTTCAGGTCTCTCCGGTCCTGCTTGATTCTAAGAAAATCAAAGTTTCAGGAGAGAATCCTGGCGTTCCCGCGGTTTCAGTGGACTCGAGCTCTGGCTCGCACTTCAATGGTGAAGTTTCGTGCAATTCGACCAGAATATCGGTTGAATTTGAAAGTAAAGGAAGGTCGAATACCAGGAAGAAAATAGTCAGCGAAGTTGGAGGTGTTCGGCAGGATCAATGCGATGAGTTGTGGAGAAGTCGGAGATCTGAGGAGCAGAAGGACAGTGAAGTTGACGTGTCTGAGTCTTCGTGTGTGGACTCGAATTCTGGAGTTGGTAAACAGAAGAGTTTGGTTTTTAAGTTCCGGAGAGGAAAAGAAAGTAAGAATGTGAAAATAATCGCAATAAATGAAGTTTCCGAAACTTGTACGAAATCCGAGACTACTTGCGAAGAGCAATGTTCCGGTGGAAACTCCATGTCCGACACCGTGAATCTTAAAATCTCGTCCGAGATTGCTGGAAACGTTGTCGTTTCAGCTGGCAGTGGTGTTCATGAGATGTTCGGGAAACAAGGCGAGGAGACCATCAGAGGAAAGGAAAACGGATCATCTGAATTTGAGTTCTCTCAAATTTCCGGAAATCATCATGCTGATGCGAATAGGATTGAGTTAAATCCACAATCGAGCATACAACAGGGATCAAATCATTTTCTCGACTATTCTGATCTTGCTTGCACAGAGCAATTGTCGTACGAGGACGTCTCAGAGCACTCTTCAAGTCAGGAGACCACATTTTCTGATCTCTATTCAGAGATCTTCCCTGAATGCTCAGAGATAGAAATTTCAGATTACTTCACTGATTCTGGAAGTCAATTCTCAGAGGGCTCCGTTGGAGAAACTCCTTCACCAACATTTTCTTTGTTCATTCAGTACAACAATGAATTTTCGAGATTGACTTCACCAGATACTGGAGCTGCTCCATGCGTCGGGGATGATACCTCACATCAACCAGACTTTTTGAGGTTTGATGATGTGGAGGATGAAGACAGCTACCAAATGCTCCGAGAGAGAGAACGGAGGCAAGAGCTTTTGTGCAATTATGCTGAGAAGTATTGCTCCAGAACCACCGAATACGGCAAGCTCGTTCTTCAGCAACGCTCGCAAATAATTCACTGGATGGTTGAGCAATCTTGTCGAAAAGAGCTTCGGCAAGAGACGATGTTTCTTGGAGTCAGCCTTCTTGACCGGTTCCTAAGCAAAGGATACTTCAAAACCAAAAGGAACCTTCAAATAGTTGGAATAGCCTGCCTCACATTGGCTACCAGGATCGAAGAAAACCAGCCCCATAACAGCGTGCGGCAGAAGAATTTCTACATAGGAAGTACTGTGTATAGTAGATGTGAAGTGGTGGCTATGGAATGGGTGGTGCAGGAGGTGCTCAGCTTCCAATGTTTTCTTCCCACCATCTACAATTTCTTGTGGTTCTACCTAAAAGCTGCTAGAGCTGATGCAAAAGTAGAGAAGAGGGTCAAGTTTCTAGCAGTGCTGGCACTTTCAGCTCAAGAGCAGCCGTGCTACTGGCCCTCAACAGTTGCTGCTGCACTTGTAATCCTGGGTTGCTTAGAAGTCAATGAAAATGCATCCCACAAAGTCAATGGGATCCACGTGAGATCAAAAGATGAGAATTTGCATAGATGTATAGAGAGTCTGGAGTGGTTGTTACGCTATCTATGA 1812 0.4503 MTIRSSRLKRKLEPEPPPCIMKKLRSKLLRRRRFQVSPVLLDSKKIKVSGENPGVPAVSVDSSSGSHFNGEVSCNSTRISVEFESKGRSNTRKKIVSEVGGVRQDQCDELWRSRRSEEQKDSEVDVSESSCVDSNSGVGKQKSLVFKFRRGKESKNVKIIAINEVSETCTKSETTCEEQCSGGNSMSDTVNLKISSEIAGNVVVSAGSGVHEMFGKQGEETIRGKENGSSEFEFSQISGNHHADANRIELNPQSSIQQGSNHFLDYSDLACTEQLSYEDVSEHSSSQETTFSDLYSEIFPECSEIEISDYFTDSGSQFSEGSVGETPSPTFSLFIQYNNEFSRLTSPDTGAAPCVGDDTSHQPDFLRFDDVEDEDSYQMLRERERRQELLCNYAEKYCSRTTEYGKLVLQQRSQIIHWMVEQSCRKELRQETMFLGVSLLDRFLSKGYFKTKRNLQIVGIACLTLATRIEENQPHNSVRQKNFYIGSTVYSRCEVVAMEWVVQEVLSFQCFLPTIYNFLWFYLKAARADAKVEKRVKFLAVLALSAQEQPCYWPSTVAAALVILGCLEVNENASHKVNGIHVRSKDENLHRCIESLEWLLRYL 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2236 603 CDD CYCLIN_SDS-like_rpt2 513 600 - -
Dere09g2236 603 Pfam Cyclin, N-terminal domain 377 509 IPR006671 -
Dere09g2236 603 Pfam Cyclin, C-terminal domain 513 597 IPR004367 -
Dere09g2236 603 MobiDBLite consensus disorder prediction 113 132 - -
Dere09g2236 603 MobiDBLite consensus disorder prediction 113 127 - -
Dere09g2236 603 Gene3D - 401 504 - -
Dere09g2236 603 SUPERFAMILY Cyclin-like 513 599 IPR036915 -
Dere09g2236 603 SUPERFAMILY Cyclin-like 370 509 IPR036915 -
Dere09g2236 603 ProSitePatterns Cyclins signature. 412 443 IPR006671 -
Dere09g2236 603 Gene3D - 505 602 - -
Dere09g2236 603 SMART cyclin_7 417 504 IPR013763 -
Dere09g2236 603 PANTHER CYCLINS 326 595 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2236 Dere-ChrDere09 32456520 32461107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2236 410 562 Core Cell Cycle Gene Families AT1G20610 35.294 1.28e-19 89.7