Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2228 ATGCCGATCTCTCTTCATCATCATCATATGCTTCCTTTCTTCCTTCTATTCATGTTCTTTACAACCCCATCTTCTTCCTCCACCGAGTCCTTCGTCTTCGCCGGCTGCTCGCAGCTGAAGTTCACGCCGGGGTCGTCCTACGAGAGCAACGTGAACTCCCTCCTCACCTCCCTCGTCAACTCAGCCATGTTCTCCAACTACAACAACTTCACCATCCTGGGCTCCACCCCACAGGACACCGTCTACGGCCTCTTCCAGTGCCGCGGCGACTTAGGCAACGCCGAGTGCTCGCGCTGTGTCGCCCGGGCGGTCAGTCAACTCGGCACGCTCTGCCTCGACGCTACCGGCGGCGCGTTGCAGCTCGACGGCTGCTTCGTCAAATATGATAACACAACGTTCCTGGGTGCGGAGGACAAAACAGCGGTCCTCAAGAAATGTGGACCGTCGATTGGCTTGACTTCCGATGCGTTGACTCGGATAGATTCTGTGCTTGCGAATTTGGGAGCGTTTGATGGCCCATTCAGGATGACTAGTTCTGGGGATGTGCGAGGTGTAGCACAGTGCGTAGGGGATTTGAGTGCGAGTGAGTGCCAAGATTGTCTCTCTAATGCGATCCAACGGCTGAGAACGGAGTGTGGGGCCGGCGCGTGGGGAGAGATGTACTTGGCCAAGTGCTACGCGCGATATTCGGGACGTGGGAGTCACTCGCCGGCTGGAAGTGATGATAGCAACAGAAACGATGAGGAGGTTGAGAAGACACTGGCAATTCTAATTGGACTCATTGCTGGTGTGGCTCTCATTATTGTATTCATTTCCTTCTTGTCCAAAGTGTGTGGCAAACAGAAAGATGGTAAATAA 858 0.542 MPISLHHHHMLPFFLLFMFFTTPSSSSTESFVFAGCSQLKFTPGSSYESNVNSLLTSLVNSAMFSNYNNFTILGSTPQDTVYGLFQCRGDLGNAECSRCVARAVSQLGTLCLDATGGALQLDGCFVKYDNTTFLGAEDKTAVLKKCGPSIGLTSDALTRIDSVLANLGAFDGPFRMTSSGDVRGVAQCVGDLSASECQDCLSNAIQRLRTECGAGAWGEMYLAKCYARYSGRGSHSPAGSDDSNRNDEEVEKTLAILIGLIAGVALIIVFISFLSKVCGKQKDGK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2228 285 FunFam cysteine-rich repeat secretory protein 3 28 133 - -
Dere09g2228 285 ProSiteProfiles Gnk2-homologous domain profile. 134 234 IPR002902 -
Dere09g2228 285 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Dere09g2228 285 Gene3D - 28 133 IPR038408 -
Dere09g2228 285 Gene3D - 158 232 IPR038408 -
Dere09g2228 285 Pfam Salt stress response/antifungal 36 130 IPR002902 -
Dere09g2228 285 Pfam Salt stress response/antifungal 177 230 IPR002902 -
Dere09g2228 285 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 10 278 - -
Dere09g2228 285 FunFam Cysteine-rich repeat secretory protein 60 154 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2228 Dere-ChrDere09 32316906 32319554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2228 9 229 Pollen Coat Proteome AT4G20670 25.000 5.17e-15 71.6