Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2205 ATGATCAAATCCAACACTTTCATTCGCAGCATCGTCAAACACTTGAAATTCGGTTCCAGCAGAGAGAGAAACAGCGAAGAGGACATACAGAGGATTGCTGCCCGGGAGCAGAAGATCTTTCTGTACGAAACCTTGAATGCTGCTACGAAGAATTTTCATCCCCATCACAAGCTTGGCGAGGGAGGATTTGGGCCAGTTTACAAGGGAAAATTAGAAGATGGGAGAGAGATTGCAGTGAAGAAGCTATCAGTCAGATCAAACCAAGGGAGGAAAGAGTTCATAAATGAGGCCAAGTTGCTGGCGCGTGTGCAACACCGCAATGTGGTGAATTTGTTAGGGTATTGTACCCATGGCTCAGAGAAGCTGCTTGTTTATGAGTATGTTCCTCAGGAGAGCCTTGACAAGATCTTATTCAAATCACACAAGAGAGGAGTACTTGACTGGACAAAGAGGTTTGGGATAATAACAGGAATAGCAAGAGGGTTGCTTTATCTGCACGAAGATTCTCACAACTGCATCATCCACAGAGACATAAAGGCCAGCAACATCTTGCTGGATGACAAATGGGTCCCCAAGATTGCTGACTTCGGCATGGCTCGTCTCTTCCCCGAAGATCAAACCCACGTCCATACCCGCGTGGCCGGAACTAGTGGATATATGGCTCCAGAATATGTGATGAATGGACGTTTAACAGTGAAGGCAGATGTATTTAGCTTTGGGGTTTTGTTGTTGGAAATTGTCAGTGGTCAACGAAATTCAACGTTTAACTTGGACATGGATGACAACCTTATAGAGTGGGCATACAAGCTCTACAAAAAAGGCAGGAGCTTAGAAATTATGGACACTTCTTTAACATCTTCAGCAGTGCCTGAACAAGTTGCAATGTGCATTCAACTAGGCCTGCTATGCACTCAAGGTGACCCTCAACTCCGGCCCACCATGCACCGGGTGGTGGTGGCATTGTCGAGGAAGCCGGGGCGCTTGGAAGAACCGACAAGACCCGGAGTGCCCGGTTCAAGATATAGAAGACATCATAGGCCTTATGCAATGTCTTCCACTGCTGGAAGTTCTAGTGAATCAAGTTCACATACTTTCGGTTCAAGCAATAATTACAGTAGTAGTAGAACTGCAACCGCAACTGCAAAAGCAAGTACCTCAAGTAGTAAAGATTTAGACCCTCATGGAAAACGTGCAATAGAAGATTAG 1206 0.4569 MIKSNTFIRSIVKHLKFGSSRERNSEEDIQRIAAREQKIFLYETLNAATKNFHPHHKLGEGGFGPVYKGKLEDGREIAVKKLSVRSNQGRKEFINEAKLLARVQHRNVVNLLGYCTHGSEKLLVYEYVPQESLDKILFKSHKRGVLDWTKRFGIITGIARGLLYLHEDSHNCIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVHTRVAGTSGYMAPEYVMNGRLTVKADVFSFGVLLLEIVSGQRNSTFNLDMDDNLIEWAYKLYKKGRSLEIMDTSLTSSAVPEQVAMCIQLGLLCTQGDPQLRPTMHRVVVALSRKPGRLEEPTRPGVPGSRYRRHHRPYAMSSTAGSSSESSSHTFGSSNNYSSSRTATATAKASTSSSKDLDPHGKRAIED 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2205 401 Gene3D Transferase(Phosphotransferase) domain 1 128 330 - -
Dere09g2205 401 Gene3D Phosphorylase Kinase; domain 1 13 127 - -
Dere09g2205 401 CDD STKc_IRAK 58 318 - -
Dere09g2205 401 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 21 372 - -
Dere09g2205 401 FunFam Cysteine-rich receptor-like protein kinase 2 128 329 - -
Dere09g2205 401 ProSiteProfiles Protein kinase domain profile. 52 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g2205 401 Pfam Protein kinase domain 53 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g2205 401 MobiDBLite consensus disorder prediction 350 388 - -
Dere09g2205 401 SUPERFAMILY Protein kinase-like (PK-like) 38 344 IPR011009 -
Dere09g2205 401 SMART serkin_6 52 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g2205 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Dere09g2205 401 MobiDBLite consensus disorder prediction 325 401 - -
Dere09g2205 401 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2205 Dere-ChrDere09 31837169 31845911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2205 40 335 Receptor kinase-like Gene Family AT4G11530 51.667 5.55e-105 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere09g2205 Pkinase 1.1e-50 CL0016