Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2203 ATGCAATCAACCATGGGAACCCAATGCTCTCTTCTCTCTCTCCTCGTCGTTGCAGTAACATTCCACCATCTTCTTCCAACCACAGCCACCACCACAGCAGCCATCTACTCCACTGCCTCTTCCGGCAGCACCGCCTTTCTCCGCACAAGTTGCAACACCACCCTCTACCCTGACCTCTGCTACTCCTCCCTCTCTCGCTACGCCCATGCTATGCGGCAAAACCCCGCCTCACTGGCCCGTGTCGCCGTAGCCGTGACCCTCTCAAAGGCCCGCCGCATGACTGCCTACGTCTCCGGCCTCTCCCGCAAAGCCAACTTCACCGCCGACTCTGGTGCTGTCGCCGCAGCGCTCCGGGACTGCTTCACCAACCTGGAGGACGCTGTGGACAACATGGGAGATTCACTACGGCAGATGCGCGAGATGGGAACCGCCGGCTCCGGCGGCGAGAAGTTCAGGTTCGAGATGAGCAACGTGCAGACGTGGATGAGCGCGGCACTGACGGACGAGGAGACGTGTACGGACGGGTTCCAGGGTGTACCGAAAGGTACGTTGAAGACGAATGTATGTGATCGTGTGGCGTACGTGAAGAAGTTAACAAGCAACGCGCTGGCGCTGGTGAATATTTATGCTAACAAGGGAACGCCCTAA 648 0.5864 MQSTMGTQCSLLSLLVVAVTFHHLLPTTATTTAAIYSTASSGSTAFLRTSCNTTLYPDLCYSSLSRYAHAMRQNPASLARVAVAVTLSKARRMTAYVSGLSRKANFTADSGAVAAALRDCFTNLEDAVDNMGDSLRQMREMGTAGSGGEKFRFEMSNVQTWMSAALTDEETCTDGFQGVPKGTLKTNVCDRVAYVKKLTSNALALVNIYANKGTP 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2203 215 CDD PMEI-like_3 49 211 - -
Dere09g2203 215 Pfam Plant invertase/pectin methylesterase inhibitor 46 205 IPR006501 GO:0004857
Dere09g2203 215 NCBIfam pectinesterase inhibitor domain 18 209 IPR006501 GO:0004857
Dere09g2203 215 SMART PMEI_2 42 205 IPR006501 GO:0004857
Dere09g2203 215 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 209 IPR035513 -
Dere09g2203 215 FunFam Pectin methylesterase inhibitor 1 42 209 - -
Dere09g2203 215 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 206 - -
Dere09g2203 215 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 209 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2203 Dere-ChrDere09 31773257 31773904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2203 47 207 Carbohydrate Esterase AT1G53840 24.405 5.96e-13 65.5