Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2202 ATGAGGACCCAACGCCTTCATTTCCTCTTCCTCTTCCTCGCCGCAACGTTCTACCATCTCCGTCCAGCAGTCGTCCCCGCCGTCGCATTTGCCGTCGACCCCACCGCCTCCGTCAATCCTGACTCCACCGCTTTCATCCGTACAAGTTGCAAGACCACCCTCTACCCCGACCTCTGCTACTCCTCCCTCTCTCCCTACGCCTACGCCGTCCAACAGAACCCCGGCAAGCTCGCTCGCGTCGCCATAGCCGTGAGCCTCTCCAAGGCTCACCGCATGGCCTCCTACGTCTCCGGCATCTCCCGCGTTGCCGACTATAGCACGGACTCCCGCGCCGCCTCGGCTCTCCGCGACTGCTTCACCAACCTCGGAGACGCCGTCGACGACATCCGCGGCTCGCTCAAGCAGATGCACCAGATAGGAGCCGCCAGCTCTGGCGGCGAGCGATTCAGGTTCGAGATGAGCAACGTGCAGACGTGGATGAGCGCGGCGCTGACGGACGAGGACACGTGTACGGACGGATTCGAGGATGTACCGGAAGGTACAGTGAAGACGAATGTATGTGATCGTGTGACGTATGTGAAGAAGTTCACCAGCAATGCGTTGGCCTTGGTGAATAGTTACGCTAACATGGGAATGTATTAG 642 0.5997 MRTQRLHFLFLFLAATFYHLRPAVVPAVAFAVDPTASVNPDSTAFIRTSCKTTLYPDLCYSSLSPYAYAVQQNPGKLARVAIAVSLSKAHRMASYVSGISRVADYSTDSRAASALRDCFTNLGDAVDDIRGSLKQMHQIGAASSGGERFRFEMSNVQTWMSAALTDEDTCTDGFEDVPEGTVKTNVCDRVTYVKKFTSNALALVNSYANMGMY 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2202 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 207 IPR035513 -
Dere09g2202 213 FunFam Pectin methylesterase inhibitor 1 41 207 - -
Dere09g2202 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 207 IPR035513 -
Dere09g2202 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 203 - -
Dere09g2202 213 NCBIfam pectinesterase inhibitor domain 31 207 IPR006501 GO:0004857
Dere09g2202 213 SMART PMEI_2 41 203 IPR006501 GO:0004857
Dere09g2202 213 CDD PMEI-like_3 48 209 - -
Dere09g2202 213 Pfam Plant invertase/pectin methylesterase inhibitor 45 203 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2202 Dere-ChrDere09 31720072 31720713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2202 33 203 Carbohydrate Esterase AT5G53370 30.636 1.74e-14 69.7