Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2181 ATGTCTGATTCATTCAGTGCCTTCAGGCTTCACTGTACTCCAAATTCCACCACTGATTCCTCAGGACCTCCTAGAATCACAATTTCTTCACTAACCCAACCTCCTTGTATTTGTGCCCACTGTGCTCATCTTTTCACCTTTAATCACCATCTGGGTTATGTTGGGGAGCAAGAAGGTGGTGGGTCCCAGCAAAACTCAAGGTGGAGTCCAACACCAGCACAGCTGCTATGCCTTGAAGAACTGTACAGACAAGGAACGAAGACCCCGACGGCCGAACAAATCCAGCAAATAGCTTCGCAGCTACGTCGTTTTGGCAAGATCGAAGGCAAGAACGTGTTCTACTGGTTCCAGAACCACAAGGCAAGAGAGCGCCAGAAACGACGCCGTTGCGACATGGGAATTACTGCTTCTTCTGCTCAAGAGAAAGAGCTGTACGTTACGGAATTGAGCTCAGAGAAGCCATTAGAGCAAGAGGCTCGTCAAGGGTTGAGAGGGACAGGTTATGAAGTTAAAGAGACAAAGAAGTGGGCATCAACTTCAAACTGCAGTGGACTTGCAGAGGTATCTGCTTCACTGGATATAGCGGAAAGGGGAGCCAAAAGGTGGACTCAATCTGAACAGATCAGAGAAACACAAATTTTGAGAAGCAAGAGAGGGCAAAGGCAAGAAGAAATTGCAGATTCTAATCCCCTCAAGAATATTTCCTCCCCAGCTACATTTCATACGCAAACTTCAAACCCTCTGAATCTGAATTATTATGATGAAGAAATTGCAGACTCCAGAACCCTCAAGCTTTTTCCACCTAAAAGGGATGAAGATGGCATTTGTCTGACTGAAAGGAACGATAAATTCTGCGCCATTGATGCTTCTATGGACTCTGAAATCACTTCCAACCAGTTCTTTGAGTTTCTGCCTTTAAGAAACTGA 927 0.4552 MSDSFSAFRLHCTPNSTTDSSGPPRITISSLTQPPCICAHCAHLFTFNHHLGYVGEQEGGGSQQNSRWSPTPAQLLCLEELYRQGTKTPTAEQIQQIASQLRRFGKIEGKNVFYWFQNHKARERQKRRRCDMGITASSAQEKELYVTELSSEKPLEQEARQGLRGTGYEVKETKKWASTSNCSGLAEVSASLDIAERGAKRWTQSEQIRETQILRSKRGQRQEEIADSNPLKNISSPATFHTQTSNPLNLNYYDEEIADSRTLKLFPPKRDEDGICLTERNDKFCAIDASMDSEITSNQFFEFLPLRN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2181 308 Pfam Homeodomain 65 125 IPR001356 GO:0003677
Dere09g2181 308 CDD homeodomain 67 127 IPR001356 GO:0003677
Dere09g2181 308 ProSiteProfiles 'Homeobox' domain profile. 61 126 IPR001356 GO:0003677
Dere09g2181 308 SMART HOX_1 63 130 IPR001356 GO:0003677
Dere09g2181 308 SUPERFAMILY Homeodomain-like 61 128 IPR009057 -
Dere09g2181 308 Gene3D - 58 126 - -
Dere09g2181 308 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 57 302 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2181 Dere-ChrDere09 31261037 31264363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2181 66 182 Wox Gene Family AT3G18010 53.846 7.31e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dere09g2181 Homeodomain 9.9e-19 CL0123