Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2170 ATGGAGTCACCAAGAAGATCCAACTCTCGCATACTCCTCCTCCTCCTCCTCCTCTGCTTCTCCATCTTCAATGTCTCAGCTTCTTCTTCTTCAAAACCAACCCCTTTCTTCCAAAAAGAAGCCCTACCCACCAAATCCGGCTACCTCCCTATTAGCCCCACCTCCGATTCCGCCATTTTCTACACATTCTACGAAGCCCAGAACCTCACTTCACCTCTCTCTCAAACCCCACTTCTCATCTGGCTCCAAGGCGGCCCTGGCTGCTCCTCTTTGATCGGCAATTTCTTTGAGCTCGGACCATGGCGCGTCACCAAATCGCTAACCCTCGATCCCAATCCTGGTTCTTGGAACAGAATCTTCGGCCTTCTTTTCCTCGATAACCCAATCGGAACTGGATTCAGTATCGCCTCAAACCCCGAAGAAATCCCAAGAGACCAAAAATCTGTAGCCAAACACCTCTTCGCTGCTATAACGAAGTTCATTCAACTTGACCCTGCTTTCAAGTATCGCCCAATTTATATTACAGGCGAAAGCTACGCTGGGAAGTATGTTCCAGCGATTGGGTATTATATATTGCAAAAAAATTCTCGTTTGAATATTTCAGAGAGGGTGAATTTGGCAGGAGTGGCGATTGGGGATGGGTTAACACACCCAGTAGTACAAGTTGGTACTCATGCTGTGAATGCTTATTATGTTGGATTGATCAATGAGAGGCAGATGAATGAGCTGGAGGAGGCTCAATTGGAAGCAATCAGATTGACCAAACTGGGGAACTGGAGTGCAGCCACGGATGCCAGAAGCAGTGCTTTGAGATTGCTGCAAAACATGACTGGGTTGGCTACTTTGTATGACTACACAAAGAAAGTTCCATATGAGGATGATTTGGTCAATGAGTTTTTGAAATCTAGTGAGGTGAAGAAGGCACTGGGGGTGAATGAATCTCTTGTGTTTGAAGGATGCAGTGATGCTGTAGGGGCTGTATTGCATGATGATGTGATGAAGAGTGTGAAGTATATGGTGGAATACTTGGTGAAGAAAACCAGGGTGCTTTTGTACCAAGGCCAGTATGACTTGAGGGATGGGGTGGTTCAAGTGGAGGCATGGGTGAAAACAATGAAATGGGAAGGTATTGACAAGTATTTGAATGCAGATAGGAAGATATGGAAGGTGAATGGTGAGATTGCAGGGTACGTGCAAAAGTGGGGAAGCCTCACTAACGTTGTGGTTTTAAGTGCTGGGCATCTTTTGCCTGCAGATCAAGCCGTGAACTCTCAAACAATGATAGAAAGCTGGGTTTTAGAGACAGATTTGTTTCAGAATGAACCACCCAAGAATGTCACACCAAGTTCTTGA 1353 0.459 MESPRRSNSRILLLLLLLCFSIFNVSASSSSKPTPFFQKEALPTKSGYLPISPTSDSAIFYTFYEAQNLTSPLSQTPLLIWLQGGPGCSSLIGNFFELGPWRVTKSLTLDPNPGSWNRIFGLLFLDNPIGTGFSIASNPEEIPRDQKSVAKHLFAAITKFIQLDPAFKYRPIYITGESYAGKYVPAIGYYILQKNSRLNISERVNLAGVAIGDGLTHPVVQVGTHAVNAYYVGLINERQMNELEEAQLEAIRLTKLGNWSAATDARSSALRLLQNMTGLATLYDYTKKVPYEDDLVNEFLKSSEVKKALGVNESLVFEGCSDAVGAVLHDDVMKSVKYMVEYLVKKTRVLLYQGQYDLRDGVVQVEAWVKTMKWEGIDKYLNADRKIWKVNGEIAGYVQKWGSLTNVVVLSAGHLLPADQAVNSQTMIESWVLETDLFQNEPPKNVTPSS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2170 450 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Dere09g2170 450 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 420 IPR001563 GO:0004185|GO:0006508
Dere09g2170 450 Coils Coil 236 256 - -
Dere09g2170 450 Gene3D alpha/beta hydrolase 26 446 IPR029058 -
Dere09g2170 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Dere09g2170 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Dere09g2170 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 404 417 IPR001563 GO:0004185|GO:0006508
Dere09g2170 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Dere09g2170 450 FunFam Carboxypeptidase 28 439 - -
Dere09g2170 450 Pfam Serine carboxypeptidase 41 432 IPR001563 GO:0004185|GO:0006508
Dere09g2170 450 SUPERFAMILY alpha/beta-Hydrolases 42 434 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2170 Dere-ChrDere09 31018701 31020053 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2170 304 432 Calmodulin-binding Proteins AT2G22960 21.705 1.29e-08 52.8