Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2155 ATGGAGGGTGGTAAGGCAGGGACGTCGTCATCATCTTACTACAGCATTCTTGGTGTTGATTTGGATTCTTCCACTGATGAAATAAGGAGAGCTTACCGCAAGCTTGCTATGCAATGGCATCCAGATAGGTGGACAAGAAAGCCTTCTTTATTGGGTAAGGCCAAACGGAAGTTTCAGCAAATTCAGGAAGCTTATTCAGTGCTATCAGACCACAAGAAAAGAACGATGTACGATGTAGGTTTGTATGATCCTGAAGACGAAGAAGATGAGGGGTTTTCGGATTTTGTGGGAGAAATGGTGTCTCTGATGGCTCAAGTGAGGAGGGAGGAAAAGGAGTACAGTATGGAGGAATTACAGAGTATGTTCAGTGAGATGGCTCATGAATTTGATCAGTCACCTTCATGGCACTGTGGACCCTTTTTTCTTGATGAGCCCCTTCACAGCCCTAAGAGGATGCGTTTGGACACCAACGTGATTGCTTGCTTGTTTGAAATGATGTTAATTTCACATTTTCTGGTTTTGGAGTTGAAGAATTCTGGTTTTAAGCTTGTTGATGTTCTTCTGAGGCGTGCTTGA 576 0.4358 MEGGKAGTSSSSYYSILGVDLDSSTDEIRRAYRKLAMQWHPDRWTRKPSLLGKAKRKFQQIQEAYSVLSDHKKRTMYDVGLYDPEDEEDEGFSDFVGEMVSLMAQVRREEKEYSMEELQSMFSEMAHEFDQSPSWHCGPFFLDEPLHSPKRMRLDTNVIACLFEMMLISHFLVLELKNSGFKLVDVLLRRA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2155 191 CDD DnaJ 13 70 IPR001623 -
Dere09g2155 191 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Dere09g2155 191 SUPERFAMILY Chaperone J-domain 10 84 IPR036869 -
Dere09g2155 191 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Dere09g2155 191 SMART dnaj_3 11 73 IPR001623 -
Dere09g2155 191 PRINTS DnaJ domain signature 14 32 IPR001623 -
Dere09g2155 191 PRINTS DnaJ domain signature 53 73 IPR001623 -
Dere09g2155 191 PRINTS DnaJ domain signature 32 47 IPR001623 -
Dere09g2155 191 Pfam DnaJ domain 13 78 IPR001623 -
Dere09g2155 191 Gene3D DnaJ domain 9 133 IPR036869 -
Dere09g2155 191 PANTHER PUTATIVE, EXPRESSED-RELATED 6 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2155 Dere-ChrDere09 30724379 30726558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2155 13 78 C2H2 Transcription Factor Family AT1G74250 46.269 2.11e-12 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g2155 09 30724379 30726558 Dere09g2155 09 30724379 30726558 ECH