Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2136 ATGGTGGAATTTGGCGGGAAAAAGGTGCGTCAAATGGTCGCAGGCCTCGGTGGTAACGGTCTCGGCCATGTCCTCGCCGCTGTGGCGGTGACTCTCCTCGTCCGGCTCTTCTCCGGTCCCGGTCCGGTGCTTTTGCCGGAAACCGAGAATGATGACCACGGCGATGGGGAGGAGATGCATGATGTTGACGAAGGTGAAGGTGAAGGTCCGATATCCGTCCAAGTTTTTCCGGTCACTATCCGGTGGAGCAACATCACGTGCTCCCTTTCTGATAAATCCTCCAAGTCTGTGAGATTTTTGCTAAAAAATGTGAGCGGAGAAGCAAAGCCTGGAAGATTATTAGCTATAATGGGGCCATCAGGTTCTGGAAAAACTACATTGCTCAATGTTCTTGCAGGTCAGCTGGCAGCATCTCCCCGACTGCATTTGTCAGGCCTATTGGAGTTCAATGGCAAACCTAGTTCAAAGAACACTCACAAGTTTGCTTATGTGAGACAGGAGGATCTATTTTTCTCACAGCTCACTGTGCGAGAAACATTATCCCTTGCTACAGAGCTCCAGCTTCCTGGCATATCTTCTGTGGAAGAGAGAGATGAATATGTGAAGAATCTGCTGTTCAAACTAGGCTTGGTCAGCTGTGCTGATACCATTATTGGCGATGCAAAAGTTCGGGGAATTAGTGGTGGTGAAAAGAAACGCTTATCTTTGGCATGTGAGCTACTTGCAAGCCCATCTGTTATATTTGCTGACGAACCTACAACCGGACTTGATGCCTTCCAGGCTGAAAAAGTGGTGGAAACTCTCCAACAACTTGCCCAAGATGGTCATACAGTAATTTGCTCTATTCATCAGCCAAGAGGTTCTGTATATAATAAATTCGACGACATTGTCTTGCTAACAGAGGGCTCACTTGTTTATGCTGGTCCTGCTCGTGATGAACCATTGGCATACTTCTCAAAATTTGGGTACCACTGCCCTGACCACGTGAATCCTGCTGAATTTTTGGCTGATCTTATATCCATTGACTACAGTTCTTCTGAAAGTGTCAATTCCTCTCAAAAGAGGATTGATGGTCTAGTTGAGTCATTCTCTCAAAGACTGTCTACAATAATATATGCAACTCCAATTACCAGAGAAGTGGTCCACAAAAGTGGAAAGAAATTTGGGATGATAACTGTAGCTAAGAAAAAAGGAGGTTGGTGGAAACAATTCTGGTTGCTCCTCAAGCGAGCATGGTTGCAGGCTTCTCGTGATGGACCGACAAACAAAGTTAGAACAAGAATGTCAATTGCGTCAGCAATTATCTTTGGTTCGGTTTTCTGGAGAATGGGAAGATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAATAAACACGGCTATGGCTGCTCTTACAAAGACTGTTGGAGTGTTTCCCAAGGAGCGTGCAATAGTAGATAGAGAACGTGCAAAGGGCTCCTATGCATTGGGTCCTTATCTCTTATCAAAATTGCTGGCTGAGATTCCCATTGGAGCAGCCTTTCCATTGATGTTTGGCGTGGTTTTGTACCCTATGGCACGTCTTCATCCTACTTTGCTGAGATTTGGGAAATTCTGTGGTATAGTCACTGTGGAATCTTTTGCTGCATCTGCGATGGGTCTTACCGTTGGAGCTATGGTTCCAACTACTGAAGCAGCCATGGCAGTGGGCCCCTCTCTTATGACTGTTTTTATAGTATTTGGAGGCTACTATGTCAATCCTGAAAATACTCCAATCATCTTCCGCTGGATTCCTCATGTTTCTCTCATTAGATGGGCCTTTCAGGGACTCTGCATCAATGAGTTTAGTGGTCTTCAATTCGAACACCAGAATTCATTTGATGTTCAAACTGGGGAACAGGCACTGGAGCGCATTTCTTTCGGAGGAAGCAAAATTAAGGATACGGTGGCAGCACAAAGCAAAATATTGTTATTTTGGTATTGCATCACCTACCTTCTCCTTGAGAAGAACAAGCCAAAGTACCAGCAACTTGAGCCACCCCGTTTTGACCACAACAAATCGCATTCCCTTGAGGAGTTTAACCCTGAACAAGATGAACAGCGACTTGAACCTCTGCCAGTCAGTCAGGTTGATTCAAATCAAGTTGATCCGGTTGAAGGTGCTGAGTAG 2163 0.4545 MVEFGGKKVRQMVAGLGGNGLGHVLAAVAVTLLVRLFSGPGPVLLPETENDDHGDGEEMHDVDEGEGEGPISVQVFPVTIRWSNITCSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGLLEFNGKPSSKNTHKFAYVRQEDLFFSQLTVRETLSLATELQLPGISSVEERDEYVKNLLFKLGLVSCADTIIGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVVETLQQLAQDGHTVICSIHQPRGSVYNKFDDIVLLTEGSLVYAGPARDEPLAYFSKFGYHCPDHVNPAEFLADLISIDYSSSESVNSSQKRIDGLVESFSQRLSTIIYATPITREVVHKSGKKFGMITVAKKKGGWWKQFWLLLKRAWLQASRDGPTNKVRTRMSIASAIIFGSVFWRMGRSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDRERAKGSYALGPYLLSKLLAEIPIGAAFPLMFGVVLYPMARLHPTLLRFGKFCGIVTVESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPHVSLIRWAFQGLCINEFSGLQFEHQNSFDVQTGEQALERISFGGSKIKDTVAAQSKILLFWYCITYLLLEKNKPKYQQLEPPRFDHNKSHSLEEFNPEQDEQRLEPLPVSQVDSNQVDPVEGAE 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2136 720 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 80 326 IPR003439 GO:0005524
Dere09g2136 720 MobiDBLite consensus disorder prediction 45 68 - -
Dere09g2136 720 MobiDBLite consensus disorder prediction 675 697 - -
Dere09g2136 720 Pfam ABC-2 type transporter 283 354 IPR043926 GO:0140359
Dere09g2136 720 ProSitePatterns ABC transporters family signature. 226 240 IPR017871 GO:0005524|GO:0016887
Dere09g2136 720 FunFam ABC transporter G family member 7 78 316 - -
Dere09g2136 720 Pfam ABC transporter 101 253 IPR003439 GO:0005524
Dere09g2136 720 Gene3D - 77 315 IPR027417 -
Dere09g2136 720 CDD ABCG_EPDR 77 308 - -
Dere09g2136 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 312 IPR027417 -
Dere09g2136 720 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 66 661 - -
Dere09g2136 720 SMART AAA_5 110 303 IPR003593 GO:0016887
Dere09g2136 720 Pfam ABC-2 type transporter 403 613 IPR013525 GO:0016020|GO:0140359
Dere09g2136 720 MobiDBLite consensus disorder prediction 675 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2136 Dere-ChrDere09 30286681 30302065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2136 100 304 Calmodulin-binding Proteins AT2G36910 28.708 5.30e-10 61.2