Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2088 ATGGAGGCGCCACCTCCTCCTGCACCCACTGCTCCGCCGCTCTCCTCCGCCGTGGCGCCGCCACTGCCCGTCCCCCTCAACTACCCTGACTCAGTCGACTCTTCTCCGCGCTCCCGGAACGCGGACTCCTGGGATGACCCTTTCCCTCCGGCCGCTGCCTCTGCCAGGCTCCGCCTTATGTGCAGCTATGGCGGCCACATCGTTCCTCGTCCTCACGACAAGTCTCTCTGTTACGTCGGCGGCGATACCCGTATCATCGTCGTTGACCGTAACACCTCTCTCTCCGAATTCTCTTCACGCCTCTCCAAGACCTTCCTCAACGGCCGTTCCTTCACTCTCAAATACCAGCTTCCCAGTGAGGACCTCGATTCCTTAATTTCTGTCACCACTGATGAAGATTTTGATAATATGATCGATGAGTATGATCGAACTACTTCCAATTCGTCCGTTAAACCCTCCAGAATCCGCCTCTTCCTGTTCCCGACGAAACCCGATTCCTCGCAATCGATTGAGCCTATACTTGATAATTCAGCGAAATCGGAGGACTGGTTCCTGAACGCGCTAAACGGCGCCGGATTGCTCAATAGAGGGTTTTCTGAGTCTGCTTCGGTAAATTGCTTGCTGGGTCTCGATGATGAGGCTGCTGGGAATAATCTGGACTCGGCTTCAAGGGAAAATGAAGCTGCGCAACAATCTGGATCTTTCGGGAATGGCAAGAATGTGATGAGGCAAGGACAGGATGTTCACTCTGTGCCTGATTCCCCTATGCTGGAAACGACGTCGTCTTTTGGGTCTACTTCTTCGTCACCTTCGCTGGCGAATCTGCCGCCGATTCGGGTTCATGTAGTGGATGATGGTAATGTTAGGATGCAAGATCAGAAGGTGGTGGGGATTGAGGATCAGTTTGCTCAAATGGGTATTGGTGTTGGTGGTGGTGGTGGTGGTGGGCAGAAGCAAGATGAGGGGTTTGTCGTTCTGTCTTCTCCTCCTCCGATGCCGGCGACTATCACCACTGCAGCAGGTGTGCCGATCGGCTCGGCTGTAGTTTCTGCCGGCGAATACCAGAATCGGATTTTCTCCGATGACGAGAGATCAGACCACGGGGTGCCTGTGGGTTACAGAAAGCCTCCAACGCCGCAGCCACAGACTCAGCTTCAGCCTCAGCCTCAAATTCTGCCTCCCCAGTTACAGCAGAAGTCAACCGGCGTCGTCGATTTGCCTTCCCCAGATTCAATTTCAAGTGATGGTAGTGTTTCAAATCCATTGTCACGTCCAAAACCTGTAATCTATCAAGAACAAGCTCAGATTCCCACTGTAACCACAAGGGTTCCTAGTAATCCTGTTGATCCAAAGCTTAATATGTCTGATCCTCACGCTCGAATCCAGATACAGCAACAGGTGCAGGATCCAGGATATGTGCTGCAACCACAATTTGATCAGCAGCAACAACCTCAACAGCACCAGCACCAGCACCAGCAGCAATATATACATAACACCCATTTCATTCACCATACTCCTTCTGGGGCTGTGACAATCCCGGCGTACTACTCTGTATATCCTTCCCAGCAACAATCCCATCCTCAGCTTGATCAACAATACCCGGTTTACTACATGCCTGCAAGACAGAGCCAGCCTTACAACTTGTCGATGCAGCAGCAGCAGCAACATAATATCGGTGATCCCGCCACAACTGTCCCTTCTAGCCGCCCCCAAGCTCAGCCAAATCAGACAATGGCTCCACCACCTGCAGCTTACAATCCCATCAGAAATGTTCCCATTCCGAAGGCTGAAATGGCAGCTGGCGCATACAGAACCGCTACTACAGGCACCCCTCAATTAGTACAAGTTCCTTCTAGTCAGCATCAGCAACAATTTGTTGCTTATTCTCAGATTCATCATCCCTCTCAGGCTGTTGCCCCCAATTCTGCTGGCCCTGCCAGTTATGCTTATGACTATGCCGATCCTGCACATGCGCAGATATACTACACTCAACCTCTGGCTCCAACGCTGCCATCACAGTACCAAACCATGGCAGCTCCTGCTGTTGTGCTGCCAGAAGTTTCCTCTCAGCATCCTTCCGACAGCATAAAGCAGCAGATAAGAACCTCTCAGCCAATATAA 2121 0.5186 MEAPPPPAPTAPPLSSAVAPPLPVPLNYPDSVDSSPRSRNADSWDDPFPPAAASARLRLMCSYGGHIVPRPHDKSLCYVGGDTRIIVVDRNTSLSEFSSRLSKTFLNGRSFTLKYQLPSEDLDSLISVTTDEDFDNMIDEYDRTTSNSSVKPSRIRLFLFPTKPDSSQSIEPILDNSAKSEDWFLNALNGAGLLNRGFSESASVNCLLGLDDEAAGNNLDSASRENEAAQQSGSFGNGKNVMRQGQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVVDDGNVRMQDQKVVGIEDQFAQMGIGVGGGGGGGQKQDEGFVVLSSPPPMPATITTAAGVPIGSAVVSAGEYQNRIFSDDERSDHGVPVGYRKPPTPQPQTQLQPQPQILPPQLQQKSTGVVDLPSPDSISSDGSVSNPLSRPKPVIYQEQAQIPTVTTRVPSNPVDPKLNMSDPHARIQIQQQVQDPGYVLQPQFDQQQQPQQHQHQHQQQYIHNTHFIHHTPSGAVTIPAYYSVYPSQQQSHPQLDQQYPVYYMPARQSQPYNLSMQQQQQHNIGDPATTVPSSRPQAQPNQTMAPPPAAYNPIRNVPIPKAEMAAGAYRTATTGTPQLVQVPSSQHQQQFVAYSQIHHPSQAVAPNSAGPASYAYDYADPAHAQIYYTQPLAPTLPSQYQTMAAPAVVLPEVSSQHPSDSIKQQIRTSQPI 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2088 706 MobiDBLite consensus disorder prediction 221 244 - -
Dere09g2088 706 MobiDBLite consensus disorder prediction 221 271 - -
Dere09g2088 706 MobiDBLite consensus disorder prediction 1 47 - -
Dere09g2088 706 MobiDBLite consensus disorder prediction 253 271 - -
Dere09g2088 706 MobiDBLite consensus disorder prediction 688 706 - -
Dere09g2088 706 MobiDBLite consensus disorder prediction 389 424 - -
Dere09g2088 706 MobiDBLite consensus disorder prediction 1 27 - -
Dere09g2088 706 MobiDBLite consensus disorder prediction 553 583 - -
Dere09g2088 706 Pfam PB1 domain 72 161 IPR000270 GO:0005515
Dere09g2088 706 CDD PB1_UP2 60 160 - -
Dere09g2088 706 ProSiteProfiles PB1 domain profile. 56 162 IPR000270 GO:0005515
Dere09g2088 706 MobiDBLite consensus disorder prediction 358 424 - -
Dere09g2088 706 SMART PB1_new 71 162 IPR000270 GO:0005515
Dere09g2088 706 MobiDBLite consensus disorder prediction 374 388 - -
Dere09g2088 706 MobiDBLite consensus disorder prediction 686 706 - -
Dere09g2088 706 SUPERFAMILY CAD & PB1 domains 72 170 - -
Dere09g2088 706 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 76 162 - -
Dere09g2088 706 Gene3D - 76 160 - -
Dere09g2088 706 PANTHER OS05G0427100 PROTEIN-RELATED 27 550 - -
Dere09g2088 706 MobiDBLite consensus disorder prediction 553 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2088 Dere-ChrDere09 29435938 29438218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2088 51 228 MAP Kinase Kinase Kinase AT1G79570 33.708 2.05e-26 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g2088 09 29435938 29438218 Dere09g2088 09 29435938 29438218 ECH