Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2084 ATGCCTCCTTTGCTTTTCTTGCTTTTTCTGCTTCTCAACTCTCTTGCACCTGCGAATTCTCTGAACGCCGAAGGCTGGGCGCTTATATCGCTGAAGCAATCCCTTACAGACCCAGAAGGGTGTCTGAGCAATTGGAATTCTTCTGATGAAAATCCATGTTCGTGGACTGGGGTGGCATGCAATTTCCAAACAGTTGTGGCCTTAAACATTCCAAAGAGTAAGCTTTATGGGTCTCTTCCTTCTTCCTTAGGGTCTCTCTCTCAGCTTCGCCATGTGAATTTCAGAAGCAACAAGCTTTTTGGGAGTGTACCCATCGAGCTATTTCAAGCCCAGAGACTTCAAAGTTTGGTCCTATATGGAAATTCCTTTTCTGGGTCTGTTCCTAATGACATTGGGAATCTCAGGTACCTCCAAACTTTGGATTTATCACAAAATTTCTTCATCGGATCGTTACCTAATACTGTTACCTCCTGCAAGCGACTCAAATATCTTGATCTAAGTCAGAACAATTTCACTGGTTCACTCCCCAATGGGTTTGGTACTAATCTGTTGTCTCTGGAAATACTGGACCTTTCTTACAATCACTTTAATGGTTCAATCCCTACTGACTTGGGAAATCTCTCAAGTCTGCAAGGAACTGTTGATTTGTCTCATAATCAGTTTAGTGGTTCAATCCCATCTAGTCTTGGAAATCTTCCAGAAAAAGTTTATATTGATCTTACTTTCAACAATTTAAGTGGTCCAATTCCCGAAAATGGTGCTTTAATAAACAGAGGACCTACTGCATTCATTGGCAATCCTAGCCTGTGTGGCCCTCCATTGAAGAATTCATGTTCTTCATATACTCCTGCTACTTCTAGTTCACCTTCTTCATTGCCAAATCTTCCTGATAACTATCCACCTCAGGACACTGATAATGATTCTAAGCAAAGTGAGAAAACCAAAGGGTTAAGCAAGAATTCTGTGATTGGCATTGTTGTGGGTGATTTGATAGGGATTTGCCTTTTGGGTTTACTTTTCTCTTTCTGCTACTCTAGAATTTGTGGTTCTGATAAGGTGAAGGATGAAAGTAATGGTTCAGAGAAGGGAGAAAGAGGGAAGAAAAAGTGTTTCTGCTTTAGAAAAGATGAATCTGAGACCTTATCTGAAAATGTTGAGCATAATAATAATAAGCTTATCCCATTGGACGCCCAAGTGGCATTTGATTTGGATGAGCTTCTAAAAGCTTCAGCTTTTGTGCTGGGAAAGAGTGGGATAGGGATTGTGTACAAAGTGGTGCTTCAAGACGGGCTTACCTTGGCCGTGAGAAGAGTAGGGGAAGGAGGTTCTCAAAGGTTTAAAGAATTCCAAACTGAAGTGGAGGCCATCGGAAAATTGAGGCATCCTAATGTTGTCACTCTCAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATCTATGATTACATATCCAATGGAAGCCTTGCTTCAGCTATTCATGAGAAGGCTGGACTTGTAACATTCACACCTCTATCTTGGTCCATGAGGGTGAAAATCATGAAAGGAACTGCAAAAGGATTGGTCTACCTGCATGAGTTTAGCCCCAAGAAATATGTCCATGGGGACTTGAAGCCAAGTAACATACTTCTCGGGCAAAACATGGAACCCCACATTGCCAATTTTGGACTCGGACGACTTGTAAACATCGCTGGATCAGGAGGGTCCCCGACCTTGCAATCAAACCGAGTTGCAGCCGAGAAGCCTCAAGAAAGACACAAGAGCTTGTCTTCATCTGATGTCACAACAAGCAGCAATATCTTAGGAAATGGCTATCAGGCTCCAGAATCTCTCAAAATGGTGAAGCCATCACAGAAATGGGATGTTTATTCATATGGTGTGGTTCTGCTTGAAATGATCACAGGAAGATTGCCCATTGTCCAAGTGGGAAACTCCGAAATGGACCTTGTTCAGTGGATTCAGTTCTGCATTGAGGAAAAGAAGCCATTTTCTGATGTTTTAGATCCTTGTTTAGCTGAAGCTGCAGATAGGGAAGAGGAGATTGTTGGAGTTTTGAAGATTGCAATGGCCTGTGTCCATGGCAGCCCTGAAAAGAGACCTACGATGAGGCATGTTCTTGATGCTTTGGATAGGTTGTCAGTTTCCTCTGATTAA 2154 0.4239 MPPLLFLLFLLLNSLAPANSLNAEGWALISLKQSLTDPEGCLSNWNSSDENPCSWTGVACNFQTVVALNIPKSKLYGSLPSSLGSLSQLRHVNFRSNKLFGSVPIELFQAQRLQSLVLYGNSFSGSVPNDIGNLRYLQTLDLSQNFFIGSLPNTVTSCKRLKYLDLSQNNFTGSLPNGFGTNLLSLEILDLSYNHFNGSIPTDLGNLSSLQGTVDLSHNQFSGSIPSSLGNLPEKVYIDLTFNNLSGPIPENGALINRGPTAFIGNPSLCGPPLKNSCSSYTPATSSSPSSLPNLPDNYPPQDTDNDSKQSEKTKGLSKNSVIGIVVGDLIGICLLGLLFSFCYSRICGSDKVKDESNGSEKGERGKKKCFCFRKDESETLSENVEHNNNKLIPLDAQVAFDLDELLKASAFVLGKSGIGIVYKVVLQDGLTLAVRRVGEGGSQRFKEFQTEVEAIGKLRHPNVVTLRAYYWSVDEKLLIYDYISNGSLASAIHEKAGLVTFTPLSWSMRVKIMKGTAKGLVYLHEFSPKKYVHGDLKPSNILLGQNMEPHIANFGLGRLVNIAGSGGSPTLQSNRVAAEKPQERHKSLSSSDVTTSSNILGNGYQAPESLKMVKPSQKWDVYSYGVVLLEMITGRLPIVQVGNSEMDLVQWIQFCIEEKKPFSDVLDPCLAEAADREEEIVGVLKIAMACVHGSPEKRPTMRHVLDALDRLSVSSD 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2084 717 FunFam Leucine-rich repeat protein kinase family protein 484 715 - -
Dere09g2084 717 Gene3D Phosphorylase Kinase; domain 1 375 483 - -
Dere09g2084 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Dere09g2084 717 Pfam Protein kinase domain 414 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g2084 717 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Dere09g2084 717 ProSiteProfiles Protein kinase domain profile. 408 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g2084 717 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 21 181 - -
Dere09g2084 717 Gene3D Ribonuclease Inhibitor 73 281 IPR032675 -
Dere09g2084 717 Gene3D Ribonuclease Inhibitor 14 72 IPR032675 -
Dere09g2084 717 SUPERFAMILY L domain-like 23 274 - -
Dere09g2084 717 SMART serkin_6 413 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g2084 717 MobiDBLite consensus disorder prediction 281 305 - -
Dere09g2084 717 MobiDBLite consensus disorder prediction 281 315 - -
Dere09g2084 717 Gene3D Transferase(Phosphotransferase) domain 1 484 717 - -
Dere09g2084 717 Pfam Leucine Rich Repeat 160 180 IPR001611 GO:0005515
Dere09g2084 717 Pfam Leucine Rich Repeat 137 157 IPR001611 GO:0005515
Dere09g2084 717 FunFam Leucine-rich repeat receptor-like protein kinase 391 483 - -
Dere09g2084 717 SUPERFAMILY Protein kinase-like (PK-like) 413 709 IPR011009 -
Dere09g2084 717 CDD STKc_IRAK 414 712 - -
Dere09g2084 717 PANTHER OS05G0588300 PROTEIN 131 712 - -
Dere09g2084 717 FunFam Leucine-rich repeat receptor-like protein kinase 185 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2084 Dere-ChrDere09 29332284 29334832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2084 5 717 Receptor kinase-like Gene Family AT2G01210 65.651 0.0 960
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere09g2084 Pkinase 1.6e-32 CL0016