Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2082 ATGGTCGCAGAAAAGGAGACATATGAGGGAGACCGAGATCAGAAGAAAAAAAAAATGGTTCCTATAGCTCGTGGTAACCTCACCACACCTCTTTTGGGGGAAGGCGGTACAGAAAAAGAGGTTTTCTCTCCCAACGACTCTTTCTTTCTCTGGCTAAGGGGTGGAGTGAGTGCTTGGCTATGGAAGATTGTTGCCCTCAAGAAGACTCATCTCCATGAGGATGAAGAAGGCGTCCCTCCCACCACTCTTTGTGAAGTTTCCATTCTGCGTATGCTCTTCAGGGATCCTCATGTCGTCAGGTTGTTGGATGTAAAACAAGTTAAAAGCTTGATGTACCAACTTTGCAAGGACGTTGCTTTCTGCCATGGTCATGGAATCTTACATAGGGATTTGAAGCCCCATAACCTCTTGATGGACCATAAGACCATGGTGCTAAAAATCGCTGATCTTGGACTGGCTCGAGCATATATTGTGCCGATCAAGAAATATACTCATGCATGA 501 0.4551 MVAEKETYEGDRDQKKKKMVPIARGNLTTPLLGEGGTEKEVFSPNDSFFLWLRGGVSAWLWKIVALKKTHLHEDEEGVPPTTLCEVSILRMLFRDPHVVRLLDVKQVKSLMYQLCKDVAFCHGHGILHRDLKPHNLLMDHKTMVLKIADLGLARAYIVPIKKYTHA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2082 166 PANTHER CELL DIVISION PROTEIN KINASE 104 165 - -
Dere09g2082 166 Pfam Protein kinase domain 104 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g2082 166 Gene3D Transferase(Phosphotransferase) domain 1 105 165 - -
Dere09g2082 166 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Dere09g2082 166 SUPERFAMILY Protein kinase-like (PK-like) 62 163 IPR011009 -
Dere09g2082 166 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2082 Dere-ChrDere09 28842764 28844204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2082 62 165 Core Cell Cycle Gene Families AT1G76540 62.238 5.89e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Dere09g2082 Pkinase 1.2e-15 CL0016