Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2079 ATGAATAGCGTCTTCAAGAAGAACAGGAAGAAGAGATCGCATGTGAGAGCTGGCCATGGCTGTATCGGCAAGCACCGGAAGCACCCAGGAGGTCGAGGTAACGCCAGAGGTACACACCACCACTGGATCCTCTTCGACAAGTACCATCCTGGTTACTTCAAGGTGAAGGACAAAGCATCCGAGAACAGAGACGTGCTGAGAATTTTCGTTGAAGCTTGGAAGTTACTGTTCTCAGCTCGCGTCGGTCTGACTCGCCAGGTTCCGGTCCCTGCTCGACTCGGTCCTGCCTCGGATGAGTTAGCATCGAAGATTGCTGCTCAATAA 324 0.5247 MNSVFKKNRKKRSHVRAGHGCIGKHRKHPGGRGNARGTHHHWILFDKYHPGYFKVKDKASENRDVLRIFVEAWKLLFSARVGLTRQVPVPARLGPASDELASKIAAQ 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2079 107 Coils Coil 97 107 - -
Dere09g2079 107 MobiDBLite consensus disorder prediction 1 36 - -
Dere09g2079 107 SUPERFAMILY Ribosomal proteins L15p and L18e 6 54 IPR036227 -
Dere09g2079 107 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 55 - -
Dere09g2079 107 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2079 Dere-ChrDere09 28678632 28679255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2079 1 53 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 83.019 8.83e-26 92.0