Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2072 ATGGGGCAACAGTCAAATGCAACAAATTTGCAACATACTCAGCTACTTGGGCAACAGAGTAGTGTTGGTGACATGCAACAACAACAGAGGTTGATTGGACAGCAAATAATCTTACAAACCTGCAACAGTACCACCCACAGGTCAAATACTTTCCCATCTTTCCCTCCATTTACAGGCACACTCGGTCCCGACTCGTACCTCCAATTTGAGCTCAACATGGACGGAGGTGCTCCGTACAATCCTTGTACGGTTGAGGAGGTCTTTAGGGATTTCAAGGGCCGCCGAGCTGGCATGATTAAGGCCCTCACTACCGAGTGGGAAGTCAATTTGCGTGCTGAGAAGGTGCCTCCAAAGCTTCCAGAACCAGCATTGGGTATTAACTTTGCCAAAGATGGGATGCAAGAAAAAGACTGGCTATCTTTGGTTGCTGTGCACAGTGATGCATGGTTACTTGCTGTAGCCTTTTATTTTGGGATGGCCAAGAAACAAGGAAAGGAGAAGTCATTAGTTTCTAATCATAGCAGTAACAAATCCAAATCAAACTCCAAAAGAGGCTCTGAATCTCAGGGAAAGTATTCAAAGGCAATGTAA 591 0.4535 MGQQSNATNLQHTQLLGQQSSVGDMQQQQRLIGQQIILQTCNSTTHRSNTFPSFPPFTGTLGPDSYLQFELNMDGGAPYNPCTVEEVFRDFKGRRAGMIKALTTEWEVNLRAEKVPPKLPEPALGINFAKDGMQEKDWLSLVAVHSDAWLLAVAFYFGMAKKQGKEKSLVSNHSSNKSKSNSKRGSESQGKYSKAM 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2072 196 PANTHER CPG BINDING PROTEIN 80 105 IPR045104 GO:0006355|GO:0042393
Dere09g2072 196 MobiDBLite consensus disorder prediction 169 196 - -
Dere09g2072 196 MobiDBLite consensus disorder prediction 167 196 - -
Dere09g2072 196 Pfam Alfin 105 171 IPR021998 GO:0006355|GO:0042393
Dere09g2072 196 Pfam Alfin 83 105 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2072 Dere-ChrDere09 28485122 28485784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2072 73 183 Alfin-like Transcription Factor Family AT5G20510 50.909 9.33e-36 122