Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2051 ATGAGTAGCAATGGTAAATCTCACGGTAGTCAAAGCACCAGAGATGTAATCTGCAACGCGGGTGCCGGTGCCGCTGCTGGGGCTATAGCGGCTACATTTGTTTGTCCATTGGATGTAATCAAGACGAGACTACAAGTTCATGGCCTTCCTCCTGGGCAGAAAGGTAGTGTCATCATCGCAAGCTTGCAGAATATAGTAAGGACAGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCACCAACAATACTAGCATTACTTCCAAACTGGGCAGTGTACTTCACAGTTTATGATCAATTGAAAGGCCTTCTCCGATCACATGATGGTTGCAACCAATTAACAACTATTGAAAATATGGTAGCTGCTGCAGGTGCTGGGGCTGCAACAGCAATTTCAACAAACCCATTGTGGGTTGTTAAGACCAGACTCCAGACACAGGGAATGAGGCCTAATGTTATTCCTTACAAAAGCATTCTTTCTGCCTTGACAAGGATAACACGTGAAGAAGGCTTGCGAGGACTATACAGTGGCATTGTGCCTTCCTTGGCTGGCGTAAGTCATGTTGCAATTCAGTTCCCTGCGTATGAAAAGATCAAGTCATACATGGCAAAAAAGGACAATACAACTGTTGACAAGCTTCGTCCTGGAAAGGTTGCCATTGCATCTTCAATTTCAAAAGTATTTGCCTCTGTAATGACTTATCCACATGAGGTGATACGTTCGAGGCTACAGGAGCAAGGCCAAGCCAAAAATGCCGGTGTCCGGTATGCCGGAGTTGTTGATTGTACTAGGAAGGTGTTTCAAAAGGAAGGTTTTGCCGGCTTCTACCGAGGCTGCGCAACAAATTTACTAAGAACAACTCCATCAGCTGTTATTACATTCACCAGTTATGAGATGATACACAGATTCCTGCTACGGATTGTACCTCAAGACAAGGGGCACTCACAAGGTTCTCCTGAATCAGATAACCTTAACAAGCCCCAGCATGATGACAGTGACATAAAATTTAAAAATGACACGGATTGGCAGCAATCGCCGTCTGAGTCTAATAAGCAAGCTTCGTCAATTCCTCTGGGAAATAATGAGCAGCTATCAAGACATTTATAG 1104 0.4466 MSSNGKSHGSQSTRDVICNAGAGAAAGAIAATFVCPLDVIKTRLQVHGLPPGQKGSVIIASLQNIVRTEGFRGMYRGLSPTILALLPNWAVYFTVYDQLKGLLRSHDGCNQLTTIENMVAAAGAGAATAISTNPLWVVKTRLQTQGMRPNVIPYKSILSALTRITREEGLRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYMAKKDNTTVDKLRPGKVAIASSISKVFASVMTYPHEVIRSRLQEQGQAKNAGVRYAGVVDCTRKVFQKEGFAGFYRGCATNLLRTTPSAVITFTSYEMIHRFLLRIVPQDKGHSQGSPESDNLNKPQHDDSDIKFKNDTDWQQSPSESNKQASSIPLGNNEQLSRHL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2051 367 MobiDBLite consensus disorder prediction 323 337 - -
Dere09g2051 367 Gene3D Mitochondrial carrier domain 1 109 IPR023395 -
Dere09g2051 367 Gene3D Mitochondrial carrier domain 110 303 IPR023395 -
Dere09g2051 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 102 IPR018108 -
Dere09g2051 367 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 15 308 IPR044712 GO:0006862|GO:0055085
Dere09g2051 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 302 IPR018108 -
Dere09g2051 367 MobiDBLite consensus disorder prediction 338 367 - -
Dere09g2051 367 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 15 303 - -
Dere09g2051 367 Pfam Mitochondrial carrier protein 17 105 IPR018108 -
Dere09g2051 367 Pfam Mitochondrial carrier protein 111 204 IPR018108 -
Dere09g2051 367 Pfam Mitochondrial carrier protein 213 304 IPR018108 -
Dere09g2051 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
Dere09g2051 367 MobiDBLite consensus disorder prediction 310 367 - -
Dere09g2051 367 SUPERFAMILY Mitochondrial carrier 14 298 IPR023395 -
Dere09g2051 367 PRINTS Mitochondrial carrier protein signature 221 243 IPR002067 GO:0055085
Dere09g2051 367 PRINTS Mitochondrial carrier protein signature 32 46 IPR002067 GO:0055085
Dere09g2051 367 PRINTS Mitochondrial carrier protein signature 19 32 IPR002067 GO:0055085
Dere09g2051 367 PRINTS Mitochondrial carrier protein signature 127 145 IPR002067 GO:0055085
Dere09g2051 367 PRINTS Mitochondrial carrier protein signature 77 97 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2051 Dere-ChrDere09 27674838 27680110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2051 11 359 Chloroplast and Mitochondria Gene Families AT1G25380 64.986 1.13e-149 425