Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2050 ATGGCATCTGGTGGAGGGAGGCGTCACCATCATAATCTTGTGCCTCTTGCTGCATTGATAAGCAGAGAGATGAAGAATGAGAAGATGGAGAAGCCCACCGTGAGATATGGGCAAGCTGCGCAGTCTAAGAAAGGGGAGGATTACTTTCTTACAAAGACTGATTGTCAGCGAGAACCTGGAAATTCTTCGTCAGCATTTTCTGCATTTGCGATCTTTGATGGACACAATGGAAATGCTGCGGCCATTTTTAGTAGGGAGCATTTGTTAAATCACACTTTGAGTGCACTTCCTCGAGGAATTGGAAGAGAGGAGTGGCTTCAAGCGTTGCCTCGGGCATTGGTTGCTGGGTTTGTGATGACTGACAAGGAGTTTCAGAGCAGAGGAAAAACTTCTGGAACTACAGCCACATTTGTGATAGTTGATAGATGGACTGTGACAGTTGCATCGGTTGGCGATTCCCGTTGTATACTAGACACCCAGGGTGCTTCTGTCAGCAACTTAACTGTTGATCACAGACTTGAGGATAACATTGAAGAGAGAGAACGTGTTGCTGCTAGTGGAGGTGAAGTTGGGAGGCTTAGCATTTATGGTGGTGCTGAGATTGGTCCCCTTCGTTGTTGGCCAGGGGGTCTATGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGGGAGTTTATAGTTCCAATACCATATGTCAAACAAGTGAAGTTATCAAATGCTGGTGGGAGGATTATAATTGCTTCTGACGGCATCTGGGATGCCCTATCTTCAGAAATGGCTGCAAAATCTTGTCGGGGTTTGCCTGCTGAACTTGCTGCAAGGCAGGTTGTGAAGGAAGCATTAAGGACAAGAGGTTTAAAAGACGATACAACTTGCATAGTAGTTGACATAATTCCTCCAGATAATGTATCACCCCCACGGCCCCCTCCCAAAAAGCAGAATAAGTTGAGAGCTCTACTATTTAGGAAGAAGTCCTGTGATTCAGCTGGTAAGCTGTCAAAGAGCCTTTCAGCTGTCAATATAGTAGAGGAACTGTTTGAAGATGGATCAGCAATGCTTGCAGAAAGACTAGGGAATGATGGCAATTCAGGGCAATCAACATCTGGCCTTTTTGTGTGCGCTGTGTGCCAAGTAGATCTTGCTCCAAGTGAAGGCATCTCTGTTCATGCTGGCTCTATTTTCTCCGCCACTTCCAAGCCTTGGCAAGGTCCTTTTCTTTGTGCTGATTGTCGCAACAAGAAGGACGCAATGGAAGGCAAACGTCCTAGTGGAATTAAAGTCTCATAG 1287 0.4592 MASGGGRRHHHNLVPLAALISREMKNEKMEKPTVRYGQAAQSKKGEDYFLTKTDCQREPGNSSSAFSAFAIFDGHNGNAAAIFSREHLLNHTLSALPRGIGREEWLQALPRALVAGFVMTDKEFQSRGKTSGTTATFVIVDRWTVTVASVGDSRCILDTQGASVSNLTVDHRLEDNIEERERVAASGGEVGRLSIYGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSNAGGRIIIASDGIWDALSSEMAAKSCRGLPAELAARQVVKEALRTRGLKDDTTCIVVDIIPPDNVSPPRPPPKKQNKLRALLFRKKSCDSAGKLSKSLSAVNIVEELFEDGSAMLAERLGNDGNSGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSATSKPWQGPFLCADCRNKKDAMEGKRPSGIKVS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2050 428 PANTHER PROTEIN PHOSPHATASE 36 296 IPR015655 GO:0004722|GO:0006470
Dere09g2050 428 SMART PP2C_4 25 295 IPR001932 -
Dere09g2050 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Dere09g2050 428 Pfam Protein phosphatase 2C 58 282 IPR001932 -
Dere09g2050 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Dere09g2050 428 CDD PP2Cc 43 297 IPR001932 -
Dere09g2050 428 SUPERFAMILY PP2C-like 41 297 IPR036457 -
Dere09g2050 428 Gene3D - 33 301 IPR036457 -
Dere09g2050 428 SMART PP2C_SIG_2 51 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2050 Dere-ChrDere09 27651029 27654661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2050 1 427 PP2C-type Phosphatase Gene Family AT1G68410 77.982 0.0 687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g2050 09 27651029 27654661 Dere09g2050 09 27651029 27654661 ECH