Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2047 ATGGCGGCACCCTCTTACTTCGTCGTACACGCTAGCTTCTTCTGTATGCTTTTCCATTTACTTCTTGCTTATGGCTCTCAAATCCCAGATTTAGAAGCTCTCATGGCGTTCAAAGCTACTTCTGATACGTTCAACAAGCTCACAACTTGGAACTCCAGCACCGACCCATGTACTTCTTGGTCCGGCGTCTCTTGCATCCGCAACCGAGTCTCGCGTCTCGTTCTCGAAAACCTTGATCTCCGAGGCTCCTTCGAACCCTTAACTTCTCTAACCCAGCTTCGAGTTCTGAGCCTCAAGCGGAACCGCCTCTCCGGCCCCATTCCGAGTCTCTCCAATTTCACAGCCTTGAAGCTTCTATTTCTATCTTACAATGAGTTTTCCGGTGACTTCCCGTCGACGGCTTCTTCGCTTTTCCGCTTGTACCGTCTTGATCTGTCTCACAATAACTTTTCCGGCGAGATTCCGTCGACGGTCAACCATTTGGCTCACATTCTCACTCTCCGTCTCGAGGAGAACCGCTTCTCCGGCAACATTCCCAGCCTGAACCTTCCTAATCTGCAGGACTTTAATGTCTCCGGGAACCGCCTCTCCGGCGAGATACCCAAATCGCTGTCGGGTTTTCCCGAATCCTGTTTTATTCTAAACCCGTCTCTCTGCGGAGCACCGATGCAGAAATGTACGGACATTGTGGCTGAACCGAGCAAACCCGGATCTGAAGGAGCCATTGCGTCGCCATTAATGCCGCGAACTAACCCGCCAACGACCATATCGTCCTCACCAAGCTCATTGCCTGCAAATGAAGCAAGCCCACCCAGGAAATCCAATTCATCAGCGAAAATAAGCCCGGTAGCTCTAATCGCCATTATTCTTGGCGACATTGTGGTTCTTGCTTTGGTCTCCCTTCTTCTCTACTGCTACTTCTGGCGAAACTACTCTGCCAAATTGAAAGACGGAAAAGGGTCGAAGCTTATGGAGAGCGAGAAAATCGTTTATTCATCGAGCCCGTACCCGGTCCAACCGGGTTTTGAGAGGGGCCGAATGGTGTTCTTCGAAGGGGTGAAGAGGTTCGAACTAGAGGACTTGCTTCGAGCTTCTGCGGAAATGCTGGGAAAAGGTGGGTTCGGGACGGCGTACAAGGCGGTTCTGGATGACGGGAGTGTCGTTGCAGTGAAGAGGCTCAAGGATGTTCAGATTGGAGGGAAGAGAGAATTCGAGCAGCACATGGAAGTTCTGGGAAGGTTAAGGCATCCCAACATTGTTAATTTGAGAGCTTACTATTTTGCAAGAGAAGAGAAGCTGCTGGTATCTGATTTCGTGCCCAATGGAAGCTTGTTCTGGCTCCTTCATGGTAACCGAGGTCCTGGGCGAACCCCACTGGACTGGACCACAAGGCTCAAAATAGCAGCTGGAGCGGCACGTGGCATAGCATTTATTCACAGCTCGTGTAAGTCCCTTAAGCTCGCCCACGGTAACATCAAATCTACGAACGTCATAGTCGACAAGGCGGGAAATGCACGCGTGGCAGATTTTGGACTCTCCATCTTTGCGGGCCCGACCAGCACTTCCGCTCCGAGATCCAACGGCTACCGTGCTCCCGAAGCCCTTGACGGTCGGAGATGCACTCAGAAGTCCGATATTTACTCCTTCGGCGTCGTCCTCCTGGAGATTCTCACCGGGAAGTGCCCATCCACCGCTGATGGCGGAGGACACGGCAGTGGGTACGGTGGTGGTGGGGTCGTGGATCTTCCGAGGTGGGTGCAGTCGGTGGTGAGGGAGGAGTGGACGGCTGAGGTGTTCGATCTTGAGCTTATGAGGTATAAGGATATTGAGGATGAGATGGTGGGGTTGCTTCAGATTGCTCTGGCTTGTACTGTGGCTGCACCCGAGCAACGGCCGAGCATGAGCCACGTGGTCAAGATGATTGAGGAAATACGTGGGGTCGAGGTGTCGCCCTGTCATGACACCGTGGATTCTGTGTCGGATTCTCCTTCCGTTTCTGAAGATGCATCTTGA 2013 0.5246 MAAPSYFVVHASFFCMLFHLLLAYGSQIPDLEALMAFKATSDTFNKLTTWNSSTDPCTSWSGVSCIRNRVSRLVLENLDLRGSFEPLTSLTQLRVLSLKRNRLSGPIPSLSNFTALKLLFLSYNEFSGDFPSTASSLFRLYRLDLSHNNFSGEIPSTVNHLAHILTLRLEENRFSGNIPSLNLPNLQDFNVSGNRLSGEIPKSLSGFPESCFILNPSLCGAPMQKCTDIVAEPSKPGSEGAIASPLMPRTNPPTTISSSPSSLPANEASPPRKSNSSAKISPVALIAIILGDIVVLALVSLLLYCYFWRNYSAKLKDGKGSKLMESEKIVYSSSPYPVQPGFERGRMVFFEGVKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDVQIGGKREFEQHMEVLGRLRHPNIVNLRAYYFAREEKLLVSDFVPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGIAFIHSSCKSLKLAHGNIKSTNVIVDKAGNARVADFGLSIFAGPTSTSAPRSNGYRAPEALDGRRCTQKSDIYSFGVVLLEILTGKCPSTADGGGHGSGYGGGGVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEDEMVGLLQIALACTVAAPEQRPSMSHVVKMIEEIRGVEVSPCHDTVDSVSDSPSVSEDAS 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2047 670 FunFam pollen receptor-like kinase 1 337 438 - -
Dere09g2047 670 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 439 651 - -
Dere09g2047 670 Gene3D Phosphorylase Kinase; domain 1 343 438 - -
Dere09g2047 670 Pfam Protein kinase domain 367 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g2047 670 MobiDBLite consensus disorder prediction 248 277 - -
Dere09g2047 670 Gene3D Ribonuclease Inhibitor 89 231 IPR032675 -
Dere09g2047 670 Gene3D Ribonuclease Inhibitor 26 88 IPR032675 -
Dere09g2047 670 FunFam Nuclear pore complex protein NUP107 27 180 - -
Dere09g2047 670 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Dere09g2047 670 ProSiteProfiles Protein kinase domain profile. 363 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g2047 670 MobiDBLite consensus disorder prediction 240 277 - -
Dere09g2047 670 SUPERFAMILY L domain-like 37 210 - -
Dere09g2047 670 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Dere09g2047 670 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 646 IPR046959 -
Dere09g2047 670 Gene3D Transferase(Phosphotransferase) domain 1 439 659 - -
Dere09g2047 670 SUPERFAMILY Protein kinase-like (PK-like) 367 642 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2047 Dere-ChrDere09 27533081 27536020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2047 30 669 Receptor kinase-like Gene Family AT1G68400 66.922 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere09g2047 Pkinase 3.3e-36 CL0016