Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2044 ATGGAAGGACTGTCTGCCCCAGCAAGCCGACGAGACCCATATGAGGTGTTGTCTGTTTCAAGGGATGCAAATGATCAGGAGATTAAAACCGCTTACAGAAAGCTCGCTCTCAAGTATCACCCTGACAAGAATGCCAGCAATCCTGAAGCTTCAGAACTTTTTAAAGAGGTTGCATTTTCATACAGTATCTTGTCTGATCCAGAGAAGAGAAAGCAATATGACAGTCTTGGATTTGAGGCACTTGAAGCTGACAGCATGGACATGGAAGTTGACTTATCCAATCTTGGAACTGTCAACACAATGTTTGCAGCTTTGTTCAGCAAGTTGGGTGTCCCTATCAAGACCACCATATCAGCTAATGTTCTTGAAGAAGCTCTGAATGGCACAGTTACAGTCAGACCCCTTCCAATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGTGTGACAATAAATGAGCAACAAGCTGAGTCAGGGGTTGTAGTAAGAGTTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAGCATGAAGCAAATGGTGGCTATGGTTTAACGTTGCAGGAAGAGAGTGAAAAGACTGGCAGGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTATAGAATGGATTCAACTGTGAATGCTTTAACAATGGCCAAGGATCCTGAAGCTGCCTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCGGAACTAAAGCCTGGCACTCATATATTTGCGGTTTATGGAGATAACTTCTTTAAGACTGCCACCTATACAATTGAGGTACTTTGTGCAAAATCATACGAGGATACCACCCAAAAACTTAAAGACATTGAGGCCCAAATTTTATTGAAAAGGAGCGAGCTACGCCAATTTGAAATGGAATATAGAAAGGCATTGGCACGCTATCAAGAAGTGACTGAAAGATACACCCAAGAAAAACAGGCTGTAGACGAGCTTTTGAAACAAAGAGATGGCATCCATTCTTCCTTTACTGTTGCCAGATCAATCATTATTAGTGGGAATGGTTTGAGTAATGGAAGTAGTAGTAGCAAATTCGCTGGTGAAGATTCCAAAACAGGGAGCCCCGGGGAAGATGGAGGCTCAGATGGCAAGGATAAGTCAGGAAGAAAGAAATGGTTTAATCTCAATCTTAATGGTTCTGGTAAGAGAATGTTTTGA 1224 0.4167 MEGLSAPASRRDPYEVLSVSRDANDQEIKTAYRKLALKYHPDKNASNPEASELFKEVAFSYSILSDPEKRKQYDSLGFEALEADSMDMEVDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEQQAESGVVVRVTSTAQSKFKLLYFEHEANGGYGLTLQEESEKTGRVTSAGMYFLHFQVYRMDSTVNALTMAKDPEAAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTATYTIEVLCAKSYEDTTQKLKDIEAQILLKRSELRQFEMEYRKALARYQEVTERYTQEKQAVDELLKQRDGIHSSFTVARSIIISGNGLSNGSSSSKFAGEDSKTGSPGEDGGSDGKDKSGRKKWFNLNLNGSGKRMF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2044 407 SMART dnaj_3 11 69 IPR001623 -
Dere09g2044 407 CDD DnaJ 12 66 IPR001623 -
Dere09g2044 407 Coils Coil 289 337 - -
Dere09g2044 407 ProSiteProfiles dnaJ domain profile. 12 77 IPR001623 -
Dere09g2044 407 FunFam Chaperone protein dnaJ 16 1 94 - -
Dere09g2044 407 SUPERFAMILY Chaperone J-domain 9 83 IPR036869 -
Dere09g2044 407 Pfam DnaJ domain 12 74 IPR001623 -
Dere09g2044 407 PRINTS DnaJ domain signature 14 32 IPR001623 -
Dere09g2044 407 PRINTS DnaJ domain signature 49 69 IPR001623 -
Dere09g2044 407 PRINTS DnaJ domain signature 32 47 IPR001623 -
Dere09g2044 407 PRINTS DnaJ domain signature 69 88 IPR001623 -
Dere09g2044 407 ProSitePatterns Nt-dnaJ domain signature. 54 73 IPR018253 -
Dere09g2044 407 Gene3D DnaJ domain 4 95 IPR036869 -
Dere09g2044 407 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 8 404 - -
Dere09g2044 407 MobiDBLite consensus disorder prediction 360 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2044 Dere-ChrDere09 27458548 27465709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2044 5 84 C2H2 Transcription Factor Family AT1G74250 41.176 3.34e-12 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g2044 09 27458548 27465709 Dere09g2044 09 27458548 27465709 ECH