Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2043 ATGGGGGATCACCAACTTCTCTACCCAACAAAAAGAACAAACCCCGTGAAGCTTTTCGGCTTCAGCGTCGTCCACGAGCCACATACAATGGAAGAAGAAGAAGAAGAAGACGAAGCAGTGCTCGCAGATGACGTCTCAGACCCAACCTCCAAGCCCACTTCCCCATCCAGATCGCCGGATTCCGCCGCCTCCGGTGGCGCCGGAGCTTTCCCTCCTTCCTCTGGCGACAGAAAATACGAGTGCCAATACTGTTGCCGCGAGTTTGCGAACTCGCAAGCACTCGGTGGCCACCAGAACGCTCACAAGAAAGAGCGTCAACAGTTGAAGCGGGCCCAGTTACAAGCCACACGAAACGCCGCCGTTTCGTTCGTTCGGAACCCGATAATCTCCGCCTTCGCGCCTCCGCCGCACCTGCTGGCTCCGGCGGGTCCCATGGTGGTTCAGGCGGCGGCTCCGCCATCTTGGGTCTATGTTCCGCCACGTGCTGCCCCTCCGCCGTTCCACGTGTCCGTATCACACGGGTGCGTGTTCCCGACGTCCGCGAATAGTACTATCTGTAGTAATAATAATGGCAACTACAGTAGTAGTAACTGTAATAGTCATAGTGGGAGATCAACGGGTGGAAGCATGTTATCCTACAGCAGCGGCATAGGGGATTCGATGGGGTCGCAAGTACAGGGCCGGGCCCATGGGACTTCTTTGAGTAGGCTTTCGAATGGGGACGGCGGGCCCAACTTTGATGACCCATTGGGCTTGGACTTGCATCTTAGCCTTGCGCCGGCTGCGCCGTGA 792 0.572 MGDHQLLYPTKRTNPVKLFGFSVVHEPHTMEEEEEEDEAVLADDVSDPTSKPTSPSRSPDSAASGGAGAFPPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFAPPPHLLAPAGPMVVQAAAPPSWVYVPPRAAPPPFHVSVSHGCVFPTSANSTICSNNNGNYSSSNCNSHSGRSTGGSMLSYSSGIGDSMGSQVQGRAHGTSLSRLSNGDGGPNFDDPLGLDLHLSLAPAAP 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2043 263 MobiDBLite consensus disorder prediction 199 248 - -
Dere09g2043 263 MobiDBLite consensus disorder prediction 28 73 - -
Dere09g2043 263 MobiDBLite consensus disorder prediction 47 61 - -
Dere09g2043 263 PANTHER ZINC FINGER PROTEIN 5 13 262 IPR044299 GO:0010090
Dere09g2043 263 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
Dere09g2043 263 Gene3D Classic Zinc Finger 70 126 - -
Dere09g2043 263 MobiDBLite consensus disorder prediction 199 240 - -
Dere09g2043 263 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Dere09g2043 263 FunFam Zinc finger protein GIS3 67 129 - -
Dere09g2043 263 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2043 Dere-ChrDere09 27421135 27421926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2043 13 261 C2H2 Transcription Factor Family AT1G68360 43.165 1.52e-49 162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g2043 09 27421135 27421926 Dere09g2043 09 27421135 27421926 ECH