Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2029 ATGAGACTTCTTTGTTTCTCTATTCACTACTCCCACTATTGCTCCCCCGTAAAATTTTACCATTCTTCGGTCACACATTTTTCTTCCGCCGCCAGCAGAAGAAACCGTTGGCCGCGCATGGGCGCAGCCGCCGCATTCTGCCGGAACCGGAGGAAAGAGAAGGTGATCGTCATAATGGGCGCCACCGGCAGCGGGAAATCACGCCTCTCCATTGACCTCGCGACCCATTTCCCCTTCTCGGAAATCATAAACTCCGACAAAATCCAAATCTACAGGCGTCTTGACATCACCACCAACAAGATCCCCATTGGCGAACGCAACGGCGTCCCTCACCATCTCCTCGGCGAGGTCAACCCAGAAGGCGGAGAGTTCACGCCGCTGGATTTTCGCCTGCGCGGCGGCTCCGTTGTGTCGGACATTACTTCGAGGAGGAAGCTTCCCATCGTCGTTGGTGGGTCCAACTCGTTCGTTCACGCCCTGCTCGCCGACCGATTCGACCCCGAGTTGAATGTGTTTGACGGGTCATTGCCGTCGTCGAGTTTGATCTCGTCGGAGTTCAGGTACAACTGCTGCTTCCTCTGGGTGGACGTGTCATTCCTTGTGTTGTCAGATTACTTAAAGAAGCGAGTCGATGACATGCTCGACTCAGGAATGGTGGACGAGTTGGCCGAGTTCTTCGACCCGCACTCGGACGATTTGGACACGGACTCCGCGAACCGGACCGGGCTCAGAAAAGCCATCGGCGTGCCGGAGTTCGACCAGTATTTCAAAAAATACCCGCCGCCGGGGGGGCTCAACGGTGCGTATTCAAGCGAGGAGGATCTGCTTCGGAAGGCTGCATACGAAGAGGCAGTGAGGGCGATAAATGACAACACGTGTCAGCTAGTGAAGAGGCAGATAGGGAAGATCTTGCGGCTAAAAGAGGCGGGGTGGGACCTACGGAGGCTGGACGCGACGGAGGCGTTAAAGGCGGCGTTGGTGGCGGCGTCGGGCGGAGGAGAGAGGTGGTCGGATATTTGGGAGAGGGAGGTGGTGGAGCCAAGCGTGAAGATTGTGAATAGGTTCTTGAGAGAGTAG 1077 0.5627 MRLLCFSIHYSHYCSPVKFYHSSVTHFSSAASRRNRWPRMGAAAAFCRNRRKEKVIVIMGATGSGKSRLSIDLATHFPFSEIINSDKIQIYRRLDITTNKIPIGERNGVPHHLLGEVNPEGGEFTPLDFRLRGGSVVSDITSRRKLPIVVGGSNSFVHALLADRFDPELNVFDGSLPSSSLISSEFRYNCCFLWVDVSFLVLSDYLKKRVDDMLDSGMVDELAEFFDPHSDDLDTDSANRTGLRKAIGVPEFDQYFKKYPPPGGLNGAYSSEEDLLRKAAYEEAVRAINDNTCQLVKRQIGKILRLKEAGWDLRRLDATEALKAALVAASGGGERWSDIWEREVVEPSVKIVNRFLRE 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2029 358 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 232 IPR027417 -
Dere09g2029 358 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 52 356 IPR039657 -
Dere09g2029 358 Gene3D - 52 356 IPR027417 -
Dere09g2029 358 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 199 313 - -
Dere09g2029 358 FunFam Adenylate isopentenyltransferase 199 313 - -
Dere09g2029 358 Pfam IPP transferase 187 300 - -
Dere09g2029 358 Pfam IPP transferase 89 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2029 Dere-ChrDere09 27132498 27133574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2029 187 356 C2H2 Transcription Factor Family AT2G27760 26.596 6.49e-13 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g2029 09 27132498 27133574 Dere09g2029 09 27132498 27133574 ECH