Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2027 ATGGAGTTCCCCTTTTGTCTCATACAGCTATACTTCCTTGACCTCATTTTAACTTGGCATCACCATTTCCTCATATCACCTTCTGTGCTTCTGTCTCTTTCTTACTTTTTGCCTATGCGTCAGAGACTTTATAGTACTGTTGAGGCCACGGGAAGGAAGGGAAGAGAAGTGGGACGAACCAGAGAGATTGGAGGAGGAGCTCTTGGATTCAGAGGTTTCTTTCAGAGTCTTCGACCAACGCAACAAGGACTCGCTCTCAATGTGGATTTCTCTGTAACTGCTTTCCACGAGAGCATAGGAGTTATTCCATACTTGCAGAAACGTCTTGAGTTCCTTCGAGATCTTTCTCAACGAAAGAAAAGAAGTTTAACTTGTGAAGAATGGAAGGAAGTGGAGAAGGCATTGAAGAACATCAGGGTCTTTGTTTGCCATAGAGAAACTATGCAGAGATACCATGTATATGGCTTAACTGAAGATGCTACTGAAAATCTTTGGTTTGCTGACAGGGATGGGAAGAATTTATGGCTTGAAAGAGAATTCAAACTCAAAGTGTCAAGAGAAATGACAAGGGTGACTGGGAGAATTCTTCACCCTCCCAAGCTAAAGCTTGGAGATGGAGGTCGTGTGAGGAACCTATTTCCTTCTCGCCATGACCGTCAATGGAAACTTTTGGATGGCCATGTCTCTGAAGAAACTAAAATTGAAAGGTGGGCACTAATAAGTTTTGGTGGTACACCTGAGCAGAAGTCTAATATCCCCATATTCATAAACCAGCTTTCACAAAGGTCATGTGAATTTAACGTGACTGAGTGGGATTTCCTTTCTAAGATGAGGGCTAGGGCTTGA 846 0.4291 MEFPFCLIQLYFLDLILTWHHHFLISPSVLLSLSYFLPMRQRLYSTVEATGRKGREVGRTREIGGGALGFRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKKRSLTCEEWKEVEKALKNIRVFVCHRETMQRYHVYGLTEDATENLWFADRDGKNLWLEREFKLKVSREMTRVTGRILHPPKLKLGDGGRVRNLFPSRHDRQWKLLDGHVSEETKIERWALISFGGTPEQKSNIPIFINQLSQRSCEFNVTEWDFLSKMRARA 281
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2027 281 CDD PAZ_argonaute_like 109 173 - -
Dere09g2027 281 Pfam Argonaute linker 1 domain 60 96 IPR014811 -
Dere09g2027 281 SUPERFAMILY PAZ domain 71 157 IPR036085 GO:0005515
Dere09g2027 281 Gene3D paz domain 92 191 - -
Dere09g2027 281 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 23 169 - -
Dere09g2027 281 SMART DUF1785_2 37 98 IPR014811 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere09g2027 Dere-ChrDere09 27093960 27095928 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2027 36 166 Eukaryotic Initiation Factors Gene Family AT1G48410 37.879 3.85e-18 82.4