Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1985 ATGAGAACAACGGCGACTGCTTCTCTTTCCTCAAGACCAAGCCTTAGCCCACAATACAGAGGCAAAGACACTTACCACCACCACCATGGCGTAGTGGTTGAGGAAATTGAAGGGCTTATTAGAGTGCACAAAGATGGACACGTGGAGCGACCCCTGATTGTTCCCTGTGTCACACCTTCTTCCTGTCCAGATCTCAATGTCACTTCAAGAGACATAACCATTGAAAATTTCACAAACACCTGGGCACGTTTCTATGTCCCTAACAACACAATTTCCCATCATCATCATCGTCATCATCATCATCAGAATCACCAGAAGCTGCCTTTGCTAATATACTTTCATGGAGGTGGGTTCTGTGTTGGCTCTGCCTCTTGGAGTTGTTACCATGACTTCCTTTCTAAACTATCATCCAAACTTCAGTGCTTAATTATGTCATTGAACTATCGTCTAGCCCCAGAAAACCCTCTACCTGCTGCTTATGAAGATGGCTTCAAATCTCTAAGATGGGTGAAACAGCAAATTCTATACCGATGTGAAGCCAGTAAATGGTGGGTTGAAAAATGCAACTTCTCTAGAATCTTCCTAGCAGGGGACAGTGCAGGTGCCAACATAGCCTATAATGTAGCCAAAATGTTATCTGCACACGAAGCTTCTTCTGCTATAAGGCCTTTAGATGTCAAGGGTATGATTCTAATACAACCTTTTTTCGGAGGAGAAGTGAGAACAGGATCAGAGAAGAGCATGGGTCAGTCTCTAAACTCTGCACTGAGCTTGGCTGCATCAGACACATATTGGCGCTTGGCTCTGCCTTGTGGTTTGAACCGTGACCACCCATGGTGCAACCCATTGGCTGAAGGGTCCATGGAATTGGAGGAATTGAGGCTATGTCCTGTGTTGGTGTGTGTGTCGGAGTTGGATATATTGAAAGATCGGAACTTGGAGCTGTGTGGTGCTCTGGCGCGAGCTGGGAAAAAGGTCGAACATTTGGTGTGCCAGGGGGTAGGGCATGCGTTTCAGATTCTGAGTAAGTCTCAGATATCACAAAGCCAAACAAATGAGTTGATGGCTCGGATCAGATCCTTCATCATGGCACTATGA 1098 0.4581 MRTTATASLSSRPSLSPQYRGKDTYHHHHGVVVEEIEGLIRVHKDGHVERPLIVPCVTPSSCPDLNVTSRDITIENFTNTWARFYVPNNTISHHHHRHHHHQNHQKLPLLIYFHGGGFCVGSASWSCYHDFLSKLSSKLQCLIMSLNYRLAPENPLPAAYEDGFKSLRWVKQQILYRCEASKWWVEKCNFSRIFLAGDSAGANIAYNVAKMLSAHEASSAIRPLDVKGMILIQPFFGGEVRTGSEKSMGQSLNSALSLAASDTYWRLALPCGLNRDHPWCNPLAEGSMELEELRLCPVLVCVSELDILKDRNLELCGALARAGKKVEHLVCQGVGHAFQILSKSQISQSQTNELMARIRSFIMAL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1985 365 Pfam alpha/beta hydrolase fold 110 339 IPR013094 GO:0016787
Dere09g1985 365 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 193 205 IPR033140 -
Dere09g1985 365 SUPERFAMILY alpha/beta-Hydrolases 27 362 IPR029058 -
Dere09g1985 365 MobiDBLite consensus disorder prediction 1 18 - -
Dere09g1985 365 MobiDBLite consensus disorder prediction 1 23 - -
Dere09g1985 365 PANTHER ARYLACETAMIDE DEACETYLASE 34 347 - -
Dere09g1985 365 Gene3D alpha/beta hydrolase 27 363 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1985 Dere-ChrDere09 26398700 26399797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1985 5 362 Carbohydrate Esterase AT5G16080 50.559 6.64e-120 348