Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1970 ATGTTTCATTATGCAATACATCTTAACATTGGTTCCTCCTTCTCCTCGTCCTCGTCCTCGTCCTCCTCCTCCGACGTTGATTCTCCACCGGCTACAGCGTACACCACCTCGCCGGTGATCATAGCTTTTACGCTCGCCATCCTTGTATGTTTCTTTGTGGGTTTCTGCCTTATCTACTTCTGCAGATGTTGTTTAACGACTTTCCTTTATTCTTGGGCCTCTCAACGCCCCGCCTCCGGCGACCTTGTTCACCGTGTTAATTCCCCCACCGGGGGCGCGTCGCCGTACCGAGGCCTCGATCCGTCGCTGCTTCAGATCTTTCCCACCTTTCCCTACGCCTCCGTGAAGGAATTCCATGGGAAAAACAAAAGCTATAGCCTGGAATGTGCCATCTGCCTCTTAGAGTTCGAGGACGACAGCTTCCTCCGCCTATTGACCGTTTGCTGCCATGTCTTCCATCAAGAATGTATCGATCTCTGGCTTGGGACCCACAAGACATGCCCGGTTTGCCGTACAGATCTTGATTCGCCAACGGAAAAATGCCAGACAACCCTAACCAGACAGTCATTCACAGAAAATAATAATGTTAATGAGACACGGATTGATGTAAAAGATGAAGAAGATGAACGACAACATCATCAACAACAAAAAGGAGTCTCCACGAGCCAGCAAGTGAGAGAACAAGAAGGAGAAGGAGGAGAAGATAAGTGGTTTTCACGGTCACACTCGACGGGGCATTCCATAGTTGTGATAAGAGGAGAAATAGGAAGAGGAGGAAATGATCAAACGAATGATGAGAAATATACGTTGAGATTGCCAGAGCATATTCAGGCTAAACTTATAAGAGGACACAACTACGCAAAAAGTTGTGCGACTTACAAAGAGATGGCATCATTGTGTAGTAAATGTTCTTATGCTGAAGCTATATCGGGTTCTACTTCCTGCGGGAATCAAAAGGTTTAA 963 0.4694 MFHYAIHLNIGSSFSSSSSSSSSSDVDSPPATAYTTSPVIIAFTLAILVCFFVGFCLIYFCRCCLTTFLYSWASQRPASGDLVHRVNSPTGGASPYRGLDPSLLQIFPTFPYASVKEFHGKNKSYSLECAICLLEFEDDSFLRLLTVCCHVFHQECIDLWLGTHKTCPVCRTDLDSPTEKCQTTLTRQSFTENNNVNETRIDVKDEEDERQHHQQQKGVSTSQQVREQEGEGGEDKWFSRSHSTGHSIVVIRGEIGRGGNDQTNDEKYTLRLPEHIQAKLIRGHNYAKSCATYKEMASLCSKCSYAEAISGSTSCGNQKV 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1970 320 PANTHER RING FINGER DOMAIN-CONTAINING 19 179 - -
Dere09g1970 320 SUPERFAMILY RING/U-box 123 179 - -
Dere09g1970 320 FunFam E3 ubiquitin-protein ligase ATL6 89 177 - -
Dere09g1970 320 MobiDBLite consensus disorder prediction 192 240 - -
Dere09g1970 320 Coils Coil 196 216 - -
Dere09g1970 320 Pfam Ring finger domain 128 171 IPR001841 -
Dere09g1970 320 ProSiteProfiles Zinc finger RING-type profile. 129 171 IPR001841 -
Dere09g1970 320 MobiDBLite consensus disorder prediction 198 215 - -
Dere09g1970 320 SMART ring_2 129 170 IPR001841 -
Dere09g1970 320 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 178 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1970 Dere-ChrDere09 26049855 26050817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1970 21 249 C3H Transcription Factor Family AT2G35420 37.931 2.39e-38 135