LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere09g1946	ATGGCTGCTTCCTCTCCCTCCGATCTCTTCACTCTTCTCTTGCCTTGCAGTTGCAGCTCTCCTCCTCTTCTGGGCTCTTTACTTCAAGTCCAGCTTTCTCCCTCACTCTCTCTCCCATCAACACTTCCAAAATGGATCCACCGTTCTTCATCCCGTGCTGATGGTGATCGGCTTCATAATCATAAGTGGAGAAGCAATATTGGTGCACAGATGGGTGGGAGGGACGAGGAGGACGAAGAAGATAGTGCATCTGTGGCTTTGGGATCAGGCATGTTTGGGATTTGGACGGAGTTCAATGCAGAACATGGCGTTCTTGCTAACTTCTTCAGTTTGCATTCATTGCAGGGTTTGATTTGCATCTTCCTCTCTGCGGCTCAGATAAGACAAAGACGAAAAGAGAACAAGACACAGTTGGATGCACACCACTACAGTGAAGGAGAGAAAGTGGCAACTGGAGAAACTGTACTGCTTGAGAAGTTGACATGCATACAGACAAGAAGAAACAATATCAATAATAATAATAATAATAATAATGTTATCAATGTTGTATCCAAACACAGCCTTGAGTCCATGGTTGCTAACAGTTTAGGGTTGGGACTTGCTCTTCTCAGTGGCTTTGTCGTATTGGCTGCTGTTTCTCCAAACTACCAATCCCTTCAAACCAACCTTGCTTAATTTTGGGTCACTGTGAAAAGTTCTAATTCTTTGAGCAATCAATTATGGAATTTTGGGGAAATGGGTGCAGGACGGTTCTGGAAATGGGTTTGCTCTCTTGACAAGTTAGGACTCATAGTTGCTGCTTCAATTGCAGCCTATAAAGTTAAGCTACTAAAGGCCAAAAATTCAAAGTCATCGGCCTCTCCATCAGAAAATGACGAAGCAAGGTCTGAAAAACATCAAGACAAGGGTCCAGAAGAAGTGCAGGAAACATGTTCTGCTTATTGTCTCAGCAAGAAAGATAAAGAGGAGGAAGAAGAAGAGGAGGTTAAGTTAATTAGCAGTATAATTAATCAAGCTCATAATCTTGAAGATGAGATTCTCCCTGAAATAGAAAATCTTCTTTCTGGCAAGACCGATAAGGCTGAGAAAGACAAAATATATGAATATGACATGGCAAACAATGCAGTTGAACTAGAACAATTGCGAAAACTAGTGAAGGAGTACGAGGAGAGGGAAGTGAAAATTGAAGGCGAATTGCTTGAGTACTATGGGTTGAAGGAGCAAGAATCAGACATTGCGGAGTTACAGAGGCAGTTGAAGATAAAGATGGTGGAAACAGATATGCTTAGAATTACCATCAATTCCTTGCAGGCGGAGAGGAAGAAGCTTCAAGAAGAGCTCGCGAATGGGTATTCAGTAAAAGAGGAGCTTGAGGAGGCCAGGAGCAAGATCAAGGAGCTGCAGAGGCAGATACAGCTTGTGGCTAACCAGACAAAAGGCCAGTTGTTGTTTCTTAAGCAACAAGTTTCAGGTCTACAAGCAAAAGAAGAAGAAGCTGTGAGAAAAGATGCTGAAATTGAGGAGAAACTGAAAGCTATGAAAGAGTTAGATTTAGAAATCGTTGAGCTTAACAGGATGAACAAAGAACTTCAACATGAAAAGCGAGAGCTGATTGTTAAACTTGATGCTTCCCAATCTGAAATAGCTACACTATCCAATACGACAGAGAGTGAAATAGTTGCCAAGGCAAAAGAAGAGGTCAGTAATCTAAGGCAAGCAAATGAAGACTTGTCAAAGCAAGTGGAAGGACTTCAGATAAATAGGTTCAGTGAAGTTGAAGAGCTAGTATATCTTCGTTGGGTTAATGCCTGTTTGAGGTATGAGCTGAGGAATTACCAGGCACCTCCTGGAAAAATATCAGCCCGCGATCTCAACAAGAGTCTTAGCCCTAAATCTCAGGGGAAGGCTAAGCAGCTGATGTTAGAATACACTGGATCAGAACGCGGGCAAGGGGACACAGATCTTTGTAACAACTACTTCTCCCAGCCCTCTTCTCCTGGAAGTGAAGATTCTGAGAATGCCTCTACTGATAGCTCTACTAGCAAAAACAGTAACGTTAGCAGGAAGACAAGCTTTATCCAAAAGATGAAGAAATGGGGTAAAAGCAAAGGTTATTCATCAGGTGCTCCTTCATCACCAAACAGATCTCTCTCAGGAAATTCTGCGGGAAGGAAGAAAAAGTGTCATGGAGATAGGGTTTCACTTGAACCCTTGATGCTAGGAAATGCTGATGATAGTGTAGCAATCACAACCTTTGGGCAGAAGGAACAAGAGCTTACTGATTCTCTAAATTCTGTTGCAGCTTCATTCCAATTGATGTCTAAATCGGTTGATGGATCTCTTGATGAAAATTATCCGGCATATAAAGACCGACATAAGTTGGCCTTTGAAAGGGAGAAGCAAATAAAGGAAACGGCTGAGCAGGCAAGAGTGCAGAAGTTTAGTGGCAACTCAAATTTGAATTCAACTAAGTCTGAAAGAGAGAGATTTATATCTTTGTCACCGAAACTTAATCAAATAAAGGAGAAGGCATTTGTATCTGGCAATCTAAATGATCAATCTGGTGATGGTAAGAATGTTGAGAATCAAACCATTAGCAAGATGACACTCGCCCATATTGAGAAAAGAGCTCCTATGGTGCCCAGGCCACCTCCTAAAGCATCTGGCTGTGCTCCTATGGGTACAAACTTGAATCTTTCCAATGGAGTACCACCTGCTCCACCAATTCTTCCTCCTCCACCTCCTCCTCCCCCGGGAAGCTTACCTGGAGGAGCAAAGGGTGATGGTAAAGTTCACCGGGCTCCTGAGCTAGTTGAACTTTATCAAACATTGATGAAACGAGAGGCAACGAAGGATGCTGCTTCATTAATTTCTTCAACACCTAATGCACCTGAAGCCAGAAACAACATCATAGGAGAAATTGAGAATAGATCATCATTCCTCTTGGCTGTGAAAGCTGATGTGGAAACGCAAGGTGATTTTGTCATGTCATTGGCAACTGAAGTTCGGGCAGCCTCCTTCTCAAACATTGATGATGTGGTGGCCTTTGTGAACTGGCTAGATGAGGAACTGTCTTTCTTGGTTGATGAACGAGCTGTCTTGAAGCATTTTGATTGGCCCGAAGGGAAAGCAGATGCCCTGAGAGAGGCAGCTTTTGAATATCGGGATCTGATGAAGTTGGAGAAGCAAATCTCCTCTTTCACTGATGATCCCAAACTCCCATGTGAAAGTGCTTTGAAGAAAATAGTCAAGCAAAGCGTATATGCACTCTTACGTACAAGAGATATGGCTATTTTGCGATACAGGGAATTTGGAATCCCAGTAAATTGGTTATTAGATTCAGGAGTCGTTGGCAAGATCAAGCTTTCTTCTGTGCAACTGGCAAAGAAGTATATGAAACGCGTGGCATCTGAACTTGATTTACTATCTGGACCTGAGAAAGAACCAGTGAGAGAGTTTTTGGTTCTGCAAGGCGTGCGTTTTGCATTCCGTGTTCATCAGTTTGCAGGAGGGTTTGATGCAGAGAGCATGAAGGCTTTTGAAGACCTGAGGAGCCGTGTCTATGCTCAATTAGAGGAAAATAATAAACCAGAAACATAA	3600	0.4269	MAASSPSDLFTLLLPCSCSSPPLLGSLLQVQLSPSLSLPSTLPKWIHRSSSRADGDRLHNHKWRSNIGAQMGGRDEEDEEDSASVALGSGMFGIWTEFNAEHGVLANFFSLHSLQGLICIFLSAAQIRQRRKENKTQLDAHHYSEGEKVATGETVLLEKLTCIQTRRNNINNNNNNNNVINVVSKHSLESMVANSLGLGLALLSGFVVLAAVSPNYQSLQTNLAXFWVTVKSSNSLSNQLWNFGEMGAGRFWKWVCSLDKLGLIVAASIAAYKVKLLKAKNSKSSASPSENDEARSEKHQDKGPEEVQETCSAYCLSKKDKEEEEEEEVKLISSIINQAHNLEDEILPEIENLLSGKTDKAEKDKIYEYDMANNAVELEQLRKLVKEYEEREVKIEGELLEYYGLKEQESDIAELQRQLKIKMVETDMLRITINSLQAERKKLQEELANGYSVKEELEEARSKIKELQRQIQLVANQTKGQLLFLKQQVSGLQAKEEEAVRKDAEIEEKLKAMKELDLEIVELNRMNKELQHEKRELIVKLDASQSEIATLSNTTESEIVAKAKEEVSNLRQANEDLSKQVEGLQINRFSEVEELVYLRWVNACLRYELRNYQAPPGKISARDLNKSLSPKSQGKAKQLMLEYTGSERGQGDTDLCNNYFSQPSSPGSEDSENASTDSSTSKNSNVSRKTSFIQKMKKWGKSKGYSSGAPSSPNRSLSGNSAGRKKKCHGDRVSLEPLMLGNADDSVAITTFGQKEQELTDSLNSVAASFQLMSKSVDGSLDENYPAYKDRHKLAFEREKQIKETAEQARVQKFSGNSNLNSTKSERERFISLSPKLNQIKEKAFVSGNLNDQSGDGKNVENQTISKMTLAHIEKRAPMVPRPPPKASGCAPMGTNLNLSNGVPPAPPILPPPPPPPPGSLPGGAKGDGKVHRAPELVELYQTLMKREATKDAASLISSTPNAPEARNNIIGEIENRSSFLLAVKADVETQGDFVMSLATEVRAASFSNIDDVVAFVNWLDEELSFLVDERAVLKHFDWPEGKADALREAAFEYRDLMKLEKQISSFTDDPKLPCESALKKIVKQSVYALLRTRDMAILRYREFGIPVNWLLDSGVVGKIKLSSVQLAKKYMKRVASELDLLSGPEKEPVREFLVLQGVRFAFRVHQFAGGFDAESMKAFEDLRSRVYAQLEENNKPET	1199

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere09g1946	1199	MobiDBLite	consensus disorder prediction	650	692	-	-
	Dere09g1946	1199	Coils	Coil	492	547	-	-
	Dere09g1946	1199	MobiDBLite	consensus disorder prediction	290	304	-	-
	Dere09g1946	1199	MobiDBLite	consensus disorder prediction	705	721	-	-
	Dere09g1946	1199	Coils	Coil	560	587	-	-
	Dere09g1946	1199	MobiDBLite	consensus disorder prediction	904	922	-	-
	Dere09g1946	1199	MobiDBLite	consensus disorder prediction	616	734	-	-
	Dere09g1946	1199	Coils	Coil	405	477	-	-
	Dere09g1946	1199	MobiDBLite	consensus disorder prediction	878	930	-	-
	Dere09g1946	1199	MobiDBLite	consensus disorder prediction	57	82	-	-
	Dere09g1946	1199	Coils	Coil	371	398	-	-
	Dere09g1946	1199	MobiDBLite	consensus disorder prediction	283	304	-	-
	Dere09g1946	1199	PANTHER	PROTEIN CHUP1, CHLOROPLASTIC	285	1187	IPR040265	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere09g1946	Dere-ChrDere09	25669087	25683075	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere09g1946	85	218	Chloroplast and Mitochondria Gene Families	AT1G26100	42.568	7.88e-19	85.5