Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1923 ATGTACGAAGAGGTGTCCGGCTTTTCAGCAGGGACGGCGTCGTTGTTGTCAGAAGATTGCTTCTCCCAAATGGCTACTTCTGCGCTCACAGAGACCCACAACCCTAGCATTCCAGAGAATGTGGGTCTCTCTATGGAAAACTTAGCCTTCGCTTCACAAGATGCTATTGCTAACACTGCTACCTCTGCATTAATGGAAGCAAACCCCTATGGTGATAGTATTGTCAATTCCCATTTGATGGAAGAGGTCAATCATCATGACTCATATCAGCTAGCTCTTTCCTTTGACCATTCCAAATGGGACAATAATATGAATCACCGTCACCAAAATCATCCTCAGGTTCAGGATCAACTACTTCCTTACCCTACACCTGATCTCCTCAATGCCCTTTACAGCTTGCCCAGTACTGCCTCAACCTTTTCATTTGTGAACTCATCCATCTCTTTTGAAAATCCGAAGACCCAGAAAACTGTTGAACTTCAAAATCCTTCTGGCCATGGCGGATTGGGTGGTGGGACCCATCCAATATTGGGGGCAGAAAGCCCAGAAGCGTCCTCTGTTTTGATCCCGGACCCCTGTTTGCATTTGAACCTGCATGCACATCCTCCAGCACTCAGAGAGTGGTTTCACTCTCCGCCTTCAAGAAATGATTTTCTGTTATTTGGTGGAGAGGATGACAGAGAAGGAAATCAGGTTGTTTCATATATAGATGCAGATCATGGAAGAGATTTTGATAATAATAATGGAGTCCTCAAGTTTACCCAGGATTTGACTCCTGTTGGCAGAAACGGAGGAGGGCGAGGTGGCAGAAGAATCAAACAGGTCTACACTGAAAAGAAAAGGAGAGTGGATTTTAGTAGTAAATTTGATGCCTTACGAGAACTCATCCCAAACCCCACCAAGAATGATAGAACATCTCTGCTGTGGGGGGCTATTGAGTATATCCGAGAGCTTCGTAGATCAGTGAATGATCTCACATTATTAGTGGATAACAAGAAATGTGGAAAAGAAAGGATCAAGAGGCACAAGGTTGAAGAAGAAGAAGCTTTAGGGGACTTGGAGAGCTGCAACTTGAAGCTCCTTAGTGAAACAGATCATCCCCTTCAACCCTGCAATAGATGCCTAATTAGGAGCTCCTGGCTTCAGAGAAAATCCGAAGACACTGAAGTTGATGTCCGTATCATTGACGACGAGGTGACAATCAAGCTTGTCCAGAGAAAGAAGAACATCAATTGCTTGCTGTATGCTTCCAAGGCTCTGGATGAACTTGAGCTGGATCTCCAACATGTTGCTGGTGGCCACATTGGCGATTTTTGCAGTTTCTTGTTCAACAGCAAGAGATATGAAGGTTCTTCTGTGTATGCGAGTGCCATAGCCAACAAGCTTATAGAAGTCATGGCCAGAAGTTCTCAAGCAGCTTAA 1422 0.4473 MYEEVSGFSAGTASLLSEDCFSQMATSALTETHNPSIPENVGLSMENLAFASQDAIANTATSALMEANPYGDSIVNSHLMEEVNHHDSYQLALSFDHSKWDNNMNHRHQNHPQVQDQLLPYPTPDLLNALYSLPSTASTFSFVNSSISFENPKTQKTVELQNPSGHGGLGGGTHPILGAESPEASSVLIPDPCLHLNLHAHPPALREWFHSPPSRNDFLLFGGEDDREGNQVVSYIDADHGRDFDNNNGVLKFTQDLTPVGRNGGGRGGRRIKQVYTEKKRRVDFSSKFDALRELIPNPTKNDRTSLLWGAIEYIRELRRSVNDLTLLVDNKKCGKERIKRHKVEEEEALGDLESCNLKLLSETDHPLQPCNRCLIRSSWLQRKSEDTEVDVRIIDDEVTIKLVQRKKNINCLLYASKALDELELDLQHVAGGHIGDFCSFLFNSKRYEGSSVYASAIANKLIEVMARSSQAA 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1923 473 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 269 318 IPR011598 GO:0046983
Dere09g1923 473 Gene3D - 266 345 IPR036638 GO:0046983
Dere09g1923 473 PANTHER TRANSCRIPTION FACTOR BHLH91 53 470 IPR045895 GO:0006355|GO:0048658
Dere09g1923 473 SMART finulus 275 324 IPR011598 GO:0046983
Dere09g1923 473 Pfam Helix-loop-helix DNA-binding domain 271 318 IPR011598 GO:0046983
Dere09g1923 473 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 266 332 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1923 Dere-ChrDere09 25255276 25257147 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1923 184 473 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G06170 42.761 4.98e-63 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere09g1923 HLH 7.5e-08 No_clan