Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1920 ATGAGCCCTCTTATCAGAGTCCTCTTAGCAGTTCCCTCGTTTTCCACACAAATCTTCCTCATGCTTTTCGAGTATCTTAAGGTGGTTTCCACCAATATAAAATGGGTACTAGATTTTCTTCTCTACCATCCCTTCTACAACGTCCATGATCATTCTCAATACGAGCTTCCTGCAGTCATCACAGAAGAAGAAGAAGAAGTGCAGATATGGCGTCCTGATGTTGAAGAAGAAGAAGTAGATTGTGCAGTGTGTCTCTGCAAGATCGGTGAAGGAGAAGAGATAAGAGTGTTGAGGTGTGAGCATGTTTTCCATAGCGATTGTTTAAATAAATGGATTGGCTTCAAAAATTATAGTTGCCCTCTTTGTAGGGACTTTGTGGGTAGTGGGGTAAGGGCCATAATTAGTGAGGTTGGAGAAGCACAAGTGCTTTATTTTAACTTTTGTTTTTTCGATAGTTCTGACGAGCCTGGGACATGGTGGCTTCGTTGA 489 0.4192 MSPLIRVLLAVPSFSTQIFLMLFEYLKVVSTNIKWVLDFLLYHPFYNVHDHSQYELPAVITEEEEEVQIWRPDVEEEEVDCAVCLCKIGEGEEIRVLRCEHVFHSDCLNKWIGFKNYSCPLCRDFVGSGVRAIISEVGEAQVLYFNFCFFDSSDEPGTWWLR 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1920 162 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 128 IPR013083 -
Dere09g1920 162 PANTHER - 17 126 - -
Dere09g1920 162 CDD RING-H2 81 123 - -
Dere09g1920 162 ProSiteProfiles Zinc finger RING-type profile. 81 123 IPR001841 -
Dere09g1920 162 SUPERFAMILY RING/U-box 67 127 - -
Dere09g1920 162 SMART ring_2 81 122 IPR001841 -
Dere09g1920 162 Pfam Ring finger domain 80 123 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1920 Dere-ChrDere09 25179655 25180143 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1920 80 123 C3H Transcription Factor Family AT1G15100 59.091 1.18e-13 63.2