Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1898 ATGGCTCAAGATACTTCTAGCATGGATTCAAATAATAAGCGTCATGGTCTCTTGAAAGATCAGGTTCGCTTGGTTAAAAGGAAAGACTCTGATCGCTATGAGATTGCTCCAATCCATGATCTTCTGTCATTTGACAAGGGTTTCTTTATAGTTATCCGTGCTTGTCAAATGTTAGCCCAAAAGAATGATGGAATAATATTGGTAGGGTTGGCTGGTCCTTCAGGGGCTGGGAAGACTATATTTACAGAGAAAATACTCAACTTCATGCCTGGCATTGCAGTCATTTCAATGGACAATTACAATGATTCCAGTCGAATTGTTGATGGAAACTTTGATGATCCACGCTTGACAGACTATGACACATTGCTCCAAAATGTTCATGATTTAAAGACAGGAAAATCAGTTGAGGTTCCAGTCTATGATTTCAAGTCCAGTTCACGCACGGGATACAGAACGGTTGAAGTCCCCAGCTCTCGCGTTGTGATTATAGAGGGCATCTATGCTTTGAGTGAGAAGCTACGACCCCTACTGGACCTTCGAGTATCTGTCACAGGTGGAGTTCACTTGGACCTTGTCAAACGAGTTATTCGTGACATACAACGTGCTGGTCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTATATCCAATGTACAAGGCTTTTATTGAGCCAGATCTCCAGACAGCACATATCAAAATTGTCAACAAGTTTAATCCATTTACTGGCTTTCAGAGTCCTACTTACATATTAAAGTCAGCAAGGAATGTAACAGTTGAGGAAATTAAAGCTGTTCTCGCTGAAGATTATAAGGAAACAACAGAGCAGACTTATGACATATATCTTCTACCTCCTGGTGAAGATCCGGAAACTTGCCAATCATATTTACGGATGCGGAATAAGGATGGGAAATACAGTCTTATGTTTGAGGAATGGGTAACTGATAATCCTTATGTCATATCACCAAGAATTACATTTGAGGTCAGTGTGCGCCTTCTTGGCGGACTAATGGCCTTGGGGTACACGATTGCTGCCATCCTTAAAAGAAACAGCCATGTATTATCTGATGATAGGATTTGTGTGAAACTTGATTGGCTTGAGCAACTTAACCGACATTATGTTCAGGTGCAAGGAAGAGATCGTTTAGTTGCAAAATATATAGCACAGCAGCTGGGTATGGATGGTTCTTACATTCCTCGTACCTACATTGAGCAAATTCAACTTGAAAAGCTTGTAAATGAGGTTATGGCCCTGCCAGATGATTTAAAGACAAAGCTTAGCCTGGACGAGGAATTGGTGTCAAGCCCAAAAGAAGCACTTTCTAGAGCCTCTGCGGACAGGGTTGCCATGAGAAATAAGCATATGAGAAGTGGCATGTCACAATCATACACAAACCAAAGGGACAAGAATCTAGCCAAACTTGCAATATATGCGTCCAAGAACCACAGCTTTGGTGAAAGAAATCTGGATTCACCAATGATACCGTCAAATCAGGGAGCCATCACTCAGCTTTCAGAGCAAATCTCTTCCCTAAATGATAGAATGGATGAGTTCACAAATCGTATCGAGGAGCTGAACTCTAAGTTAACCATCAAGAAAAATTCTCCAAGCCAACAGAACATGTCACTCCAAGCTGAAGCCTGCAATGGTTCTGTTCCCACCACTTTTTTCCTCACTAGTCTGGGCAATGGCTCCCTAACTGGATCCATTATGCCAAATTCCTCATCATCATCACAATTAGCTAAAGATTCACCTTTAATTGAAGAGATATCTGGAATTGCACGGGGTCAGCGTCAGATCATGCACCAACTCGACAATTTGAATAATTTTCTTCGGGGAAGCATGGCAGAGAAGTCTAACCAAACAAGAACCAGAAAGAAAACCATGGCTGCTGAATCAGATTCAACTGGTGTGCGTATTATGGTGACAGTGGCTATTGGGTGTTTGGGGATCTTCTTGGTGAAGAGTTTGTTTACCAGAAACTGA 1992 0.4157 MAQDTSSMDSNNKRHGLLKDQVRLVKRKDSDRYEIAPIHDLLSFDKGFFIVIRACQMLAQKNDGIILVGLAGPSGAGKTIFTEKILNFMPGIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNVHDLKTGKSVEVPVYDFKSSSRTGYRTVEVPSSRVVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIVNKFNPFTGFQSPTYILKSARNVTVEEIKAVLAEDYKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPYVISPRITFEVSVRLLGGLMALGYTIAAILKRNSHVLSDDRICVKLDWLEQLNRHYVQVQGRDRLVAKYIAQQLGMDGSYIPRTYIEQIQLEKLVNEVMALPDDLKTKLSLDEELVSSPKEALSRASADRVAMRNKHMRSGMSQSYTNQRDKNLAKLAIYASKNHSFGERNLDSPMIPSNQGAITQLSEQISSLNDRMDEFTNRIEELNSKLTIKKNSPSQQNMSLQAEACNGSVPTTFFLTSLGNGSLTGSIMPNSSSSSQLAKDSPLIEEISGIARGQRQIMHQLDNLNNFLRGSMAEKSNQTRTRKKTMAAESDSTGVRIMVTVAIGCLGIFLVKSLFTRN 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1898 663 PANTHER URIDINE KINASE 19 423 - -
Dere09g1898 663 Pfam CYTH domain 264 404 IPR023577 -
Dere09g1898 663 PRINTS Uridine kinase signature 224 237 - -
Dere09g1898 663 PRINTS Uridine kinase signature 65 82 - -
Dere09g1898 663 PRINTS Uridine kinase signature 132 147 - -
Dere09g1898 663 PRINTS Uridine kinase signature 188 198 - -
Dere09g1898 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 236 IPR027417 -
Dere09g1898 663 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Dere09g1898 663 Coils Coil 503 537 - -
Dere09g1898 663 CDD UMPK_like 67 239 - -
Dere09g1898 663 Gene3D - 253 413 - -
Dere09g1898 663 SUPERFAMILY CYTH-like phosphatases 262 407 IPR033469 -
Dere09g1898 663 Gene3D - 66 249 IPR027417 -
Dere09g1898 663 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1898 Dere-ChrDere09 25005947 25013767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1898 53 236 PRT Gene Family AT1G55810 28.866 4.55e-17 82.4