Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1897 ATGGCGATTATGGGACCTTATTCCTTTGGTTTGAACTCCTTCTTGTATCTTCAGCTCAGTATTGCTGTTACTTTTGGCTTTCTTGTTGTGGCTAGAGTGTGTGCTGGTGAGCCTGCATTGACACTTGATTACTATGCTTCATCTTGCCCCACCGTGTTTGAAGTTGTGAGGAAGGAAATGGAGTGCGCAGTGCAATCTGATCCCCGCAATGCAGCCATGATGCTTCGCCTTCACTTCCATGACTGCTTTGTCCAGGGATGCGATGGATCAGTGTTGCTTGATGATACAGTGACACTGAAGGGAGAGAAGAAAGCATCTACCAACGTCCACTCTTTAAAAGGCTTCAGACTCGTTGATAGAATCAAGAACATGCTTGAATCTGAATGCCCTGGAGTTGTCTCTTGTGCTGATCTTCTCACTATTGCAGCTAGAGATGCTGTCATTCTGGTTGGTGGACCATACTGGGATGTCCCAGTGGGAAGGAAGGACTCTGTAACAGCAAACTTGGGACTCGCCAACACCAACCTTCCAACTCCAGATGACTCTCTTCTCTCTCTCATTTCCAAGTTTCTCTATAAGGGCCTCTCTGTCACAGATCTGGTAGCCCTTTCAGGAGCTCACACAATCGGCATGGCGCGATGTCAGAATTTCCGAGCAAGGATTTACGGAGACTTCGAATTAACGTCAGAGAAAAACCCTGTCTCAGAGAGTCAGCTTAGCAACCTAAGATCAATTTGTCCTCCTATGAAAGGAGGAGACAACAACGTATCAGCAATGGACTATGTCACCCCTAACCTCTTTGACAATTCCTTCTACCACTTGCTTCTAAAGGGAGAGGGATTGCTTAACTCAGACCAAGAATTGTACACAAGTGTGTTTGGAATTCAAACAAGAGAGCTTGTCAAGAAGTATGCAGCAGAGCCTCTTGCATTCTTCCAGCAATTCTCAGATTCAATGGTGAAATTGGGGAATATCACAAACCCAGAAAGCTTTGTGAATGGAGAAGTTAGGAAGAATTGCAGATTTGTTAACACTTGA 1038 0.4518 MAIMGPYSFGLNSFLYLQLSIAVTFGFLVVARVCAGEPALTLDYYASSCPTVFEVVRKEMECAVQSDPRNAAMMLRLHFHDCFVQGCDGSVLLDDTVTLKGEKKASTNVHSLKGFRLVDRIKNMLESECPGVVSCADLLTIAARDAVILVGGPYWDVPVGRKDSVTANLGLANTNLPTPDDSLLSLISKFLYKGLSVTDLVALSGAHTIGMARCQNFRARIYGDFELTSEKNPVSESQLSNLRSICPPMKGGDNNVSAMDYVTPNLFDNSFYHLLLKGEGLLNSDQELYTSVFGIQTRELVKKYAAEPLAFFQQFSDSMVKLGNITNPESFVNGEVRKNCRFVNT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1897 345 Gene3D - 43 344 - -
Dere09g1897 345 CDD secretory_peroxidase 40 343 IPR033905 GO:0004601|GO:0042744
Dere09g1897 345 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Dere09g1897 345 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 PRINTS Haem peroxidase superfamily signature 260 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Dere09g1897 345 FunFam Peroxidase 43 184 - -
Dere09g1897 345 Gene3D Peroxidase, domain 2 177 322 - -
Dere09g1897 345 PANTHER PEROXIDASE 72-RELATED 39 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 PRINTS Plant peroxidase signature 317 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 PRINTS Plant peroxidase signature 258 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 PRINTS Plant peroxidase signature 274 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 SUPERFAMILY Heme-dependent peroxidases 40 344 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 FunFam Peroxidase 177 322 - -
Dere09g1897 345 ProSiteProfiles Plant heme peroxidase family profile. 39 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1897 345 Pfam Peroxidase 56 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1897 Dere-ChrDere09 24991126 24994346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1897 40 345 Peroxidase AT1G68850 73.290 1.40e-175 489