Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1894 ATGGAGCCTTCCCAAGCTTCAGGGGAATTTAGTGGCAATAATGAGTCTGGATGGACTACATATTTTGGTTCTCACCTACGCACAGAGACATGCTATAATGATGATGACGACGATGATGAAGCTGAGGAAAGTGTAGAAGATGATGATGGTGATAAAGATGATAATGAAGAGAGTGATGATTCAATGGCTTCTGATGCATCCTCTGGTCCAAGTCGCTTTCAAAATTTAGGCATAAACAGTGAGGGAAGTCATGGCTCTGATCAGTTTATAAAGCATAAGGATAGTAATCATAAAAGCCTCTTCTCAGCCAAGAGAACTAGCAAGCAGGAAAGGAAGAGAAGATACAGAAGGAATGTTGAAGTAAAAGAAGAGGAAGAAGAAGATGAAGAACTGCTGGTAGATGCAGATAGTGCTGGCAGTCATAAAGCAGCAAAAAGCATTTACTCGTCCATGGCAAATGAGGGTCAAGTCCACAGAACCAAGAATCAAATTCCTGAGACTTCTATCATGAATTTGCGCGCCAACTTCTCCACCCCTCTCCCTTCATCTCTTCGCATTCAGCCCTCAATTCACCCTCCCCGGAGAAGTCTCGCCGTCTCAGCCCAACTCTCGACCGCCGCAGCCGCCAATTTCTCCGTCTCCGACGAAACCCTAGAATCCCGTGGCTTCCAACTCCGGCGCACCACCGACGACCTCAACCTCGATCAGCTCAACGCCGTCTTCGTGGCGGTCGGGTTCCCGAGACGTGACCCGGAGAAGATCCGGATTGCGCTGGAGAACACGGACACGTTGCTGTGGGTGGAGTACAAGAAGACGAAGAAGCCGGTGGCGTTTGCGAGAGCGACGGGGGACGGTGTGTTCAACGCGATCATATGGGACGTGGTGGTGGATCCGTCGTTCCAAGGGATCGGGTTGGGGAAGGCGGTGATGGAGAGGCTGATCGAGGAGTTGTTGGGGAAGGGGATTTCTAACATCGCTCTGTATTCGGAGCCCCGAGTTCTCGGGTTCTACAGGCCATTGGGCTTCGTCGCGGATCCGGATGGGATCCGAGGAATGGTGTACTCTAGGAAACAGAAAAAGAAAAAATAA 1089 0.5014 MEPSQASGEFSGNNESGWTTYFGSHLRTETCYNDDDDDDEAEESVEDDDGDKDDNEESDDSMASDASSGPSRFQNLGINSEGSHGSDQFIKHKDSNHKSLFSAKRTSKQERKRRYRRNVEVKEEEEEDEELLVDADSAGSHKAAKSIYSSMANEGQVHRTKNQIPETSIMNLRANFSTPLPSSLRIQPSIHPPRRSLAVSAQLSTAAAANFSVSDETLESRGFQLRRTTDDLNLDQLNAVFVAVGFPRRDPEKIRIALENTDTLLWVEYKKTKKPVAFARATGDGVFNAIIWDVVVDPSFQGIGLGKAVMERLIEELLGKGISNIALYSEPRVLGFYRPLGFVADPDGIRGMVYSRKQKKKK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1894 362 Pfam Acetyltransferase (GNAT) family 246 342 IPR000182 GO:0016747
Dere09g1894 362 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 233 346 IPR016181 -
Dere09g1894 362 MobiDBLite consensus disorder prediction 1 27 - -
Dere09g1894 362 FunFam Putative acetyltransferase NSI 228 355 - -
Dere09g1894 362 MobiDBLite consensus disorder prediction 33 61 - -
Dere09g1894 362 MobiDBLite consensus disorder prediction 62 85 - -
Dere09g1894 362 MobiDBLite consensus disorder prediction 1 132 - -
Dere09g1894 362 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 223 360 IPR000182 GO:0016747
Dere09g1894 362 Gene3D - 218 352 - -
Dere09g1894 362 Coils Coil 105 132 - -
Dere09g1894 362 MobiDBLite consensus disorder prediction 86 106 - -
Dere09g1894 362 CDD NAT_SF 274 328 - -
Dere09g1894 362 PANTHER ACYL-COA N-ACYLTRANSFERASE 147 360 IPR045039 GO:0008080
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1894 Dere-ChrDere09 24963236 24969088 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dere09g1894 Acetyltransf_1 3.5e-13 CL0257