Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1891 ATGATCTCAAGTGAGATTAGAGGAATCCACTACCTAACCCCACAAGGCTTGAACAAACTCCTTCCCAACAACGAATTCCAAAACCTTCATGTAAACACCCTGTTCACCAACTTCTCCGGAACAAGCCATCATCATCACGAACTCAACGTGGCTCCTTCATCTTCAACTTCTGACGAAGCCGACGACCACCAGACAGGCATGATCGACGAAAGGAAGCAGAGGCGAATGATATCCAACAGAGAGTCGGCTCGAAGGTCGAGGATGAGGAAGCAGAGGCACATGGACGAGCTGTGGTCGCAGGTGGTCAGACTCAGAACAGAGAACCACAACCTCGTTCATAGACTGAACCATATGTCGGAGTCCCATGATACGGTTCTTCAGGAGAATGCTAAGCTCAAGGAAGAAGCTTCTGATCTCCGCCAAATGGTTGCAGATTTGCAGATTGCGTCCTCTTTTGCTGACGCCCTAAGGGATTTTGATGAGCTCTGA 489 0.4908 MISSEIRGIHYLTPQGLNKLLPNNEFQNLHVNTLFTNFSGTSHHHHELNVAPSSSTSDEADDHQTGMIDERKQRRMISNRESARRSRMRKQRHMDELWSQVVRLRTENHNLVHRLNHMSESHDTVLQENAKLKEEASDLRQMVADLQIASSFADALRDFDEL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1891 162 CDD bZIP_plant_GBF1 72 123 IPR045314 GO:0003700|GO:0006355
Dere09g1891 162 Gene3D - 69 124 - -
Dere09g1891 162 SMART brlzneu 67 131 IPR004827 GO:0003700|GO:0006355
Dere09g1891 162 SUPERFAMILY Leucine zipper domain 71 121 IPR046347 GO:0003700|GO:0006355
Dere09g1891 162 Coils Coil 115 149 - -
Dere09g1891 162 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 74 89 IPR004827 GO:0003700|GO:0006355
Dere09g1891 162 MobiDBLite consensus disorder prediction 43 66 - -
Dere09g1891 162 Pfam bZIP transcription factor 71 129 IPR004827 GO:0003700|GO:0006355
Dere09g1891 162 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 69 132 IPR004827 GO:0003700|GO:0006355
Dere09g1891 162 MobiDBLite consensus disorder prediction 43 61 - -
Dere09g1891 162 FunFam BZIP transcription factor 69 120 - -
Dere09g1891 162 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 23 157 IPR044521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1891 Dere-ChrDere09 24950825 24951313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1891 34 158 bZIP Transcription Factor Family AT3G30530 58.268 2.06e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere09g1891 bZIP_1 8.1e-13 CL0018