Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1890 ATGATCCCAAGTGGGATCACAGGAATCCACTACCTTATCCAACATGACTTGAACACCTTCCTTCACAAAAACGAAAACCAGAACCTTCACGTAAACTCCTTCTTCACCGATTTATATGGAGCAAGCCATCACCATCATGAACTCAACGTGGTTCCTTCTTCCTCAACTTCCGACGAAGCCGACGACCACCAGACGAGCATGATCGACGAAAGGAAGCTGAGGCGAATGATATCCAACAGAGAGTCGGCTCGAAGGTCGAGGATGAGGAAGAAGAGGCACATGGACGAGCTAAGGTCGCAGGTGGTCAGACTCAGAACGGAGAACCACAACCTCGTTCATAGACTGAACCATATGTCGGAGTCCTATGACAGGGTTCTTCAGGAGAATGCTAAGCTCAAGGAAGAAGCTTCTGATCTTCGCCAAAGAGTAGCAGCTTTGCAGATTGGGTTTTCTCTTGATAACGCACTGACGGATTTTGATGAGCCTCTCTGCAATACAGGACAGTGTGCAGAGGCCTAG 519 0.4855 MIPSGITGIHYLIQHDLNTFLHKNENQNLHVNSFFTDLYGASHHHHELNVVPSSSTSDEADDHQTSMIDERKLRRMISNRESARRSRMRKKRHMDELRSQVVRLRTENHNLVHRLNHMSESYDRVLQENAKLKEEASDLRQRVAALQIGFSLDNALTDFDEPLCNTGQCAEA 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1890 172 SMART brlzneu 67 131 IPR004827 GO:0003700|GO:0006355
Dere09g1890 172 CDD bZIP_plant_GBF1 72 123 IPR045314 GO:0003700|GO:0006355
Dere09g1890 172 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 19 148 IPR044521 -
Dere09g1890 172 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 69 132 IPR004827 GO:0003700|GO:0006355
Dere09g1890 172 Gene3D - 69 125 - -
Dere09g1890 172 Pfam bZIP transcription factor 71 129 IPR004827 GO:0003700|GO:0006355
Dere09g1890 172 Coils Coil 87 149 - -
Dere09g1890 172 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 74 89 IPR004827 GO:0003700|GO:0006355
Dere09g1890 172 FunFam BZIP transcription factor 69 120 - -
Dere09g1890 172 SUPERFAMILY Leucine zipper domain 71 122 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1890 Dere-ChrDere09 24935747 24936265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1890 38 148 bZIP Transcription Factor Family AT3G30530 56.897 1.04e-38 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere09g1890 bZIP_1 2.7e-12 CL0018