Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1838 ATGGATCAGAGTGCTTTCTCTTTCCGAACCCGGAAAGCCCGACCCAAATCCGAGCTGTATTCCACCGTCGTCGTGCACGACGACTACGAAGACGACGGCGACGGTGGCTACGACAAGCGAGAGCAAAGCCGCGGCCGGCGTAATGCCAAAAGCTCGGGACCCGAGGATGATCCTTATGCAACTATGGTCTACAAATACAATGGCAATGAAGAAGACGAAGATGACGACTCCTCCCTCCCCCCTCTTCTCAAGCGCCTACCCAAGGACTTCGGCGGCGGAGCCTCGATGGACTACGAAGACGATCCTGACGATGATGCCGGCGATTTTGGCACCATGATCGTCAAGACCGACCGAAGTCGGCAAGGAAATCGGTCTTCTTCGTCGTTGTCGTCGCCCATGGATTCGACCTGGAAGTCTTGGAAATCTCCTCTGAGGCAGGCAAGTCCAATGACGGGACTGGGTGTTGGGGAGGATGAAGATGATGACGGTGGCGAAGGTTTTTCAACCTTTGTTGTGCGTTCAACGGCAAGGTCCTGTGAGAGGGAGTCGATCAGCGGAACCGTGGTGCGGAGAACAAGTTGTGGTGTTGGCAGTGGCGGGGCCGGTACTGGTTCGACAATGGAAAGAGCGGTGGCAAGTATGCAGGCATCTTGCGAGCTAGGCTTTGGGAAACAGAGAAGGGGAAGTGGGCCCTTGCAGAACGACGAGGGTAGGCAGTCGTTAGCGACGAAGGTTTCGTCCAGTTCGATCCCAGAAAGTGTTACCAGAGAGGATCCTACAACCAAGTACGAATTGCTCAATGAACTTGGGAAGGGATCTTACGGATCTGTTTACAAAGCTAGGGATTTAAAAACCTCAGAGCTTGTTGCTATCAAAGTCATTTCACTTTCTGAAGGGGAGGAGGGATATGAGGAAATCCGTGGTGAAATTGAGATGCTACAGCAATGTAATCATCCAAATGTTGTGCGCTATCTTGGAAGCTATCAAGGAGAAGAGTATCTTTGGATAGTTATGGAATATTGTGGTGGTGGTAGTGTTGCTGACCTAATGAATGTGACTGAGGAGCCACTGGATGAGGGTCAGATAGCATATATCTGTAGAGAAGCACTGAAGGGACTGGAATATTTGCACTCAATTTTCAAAGTCCATAGAGACATTAAAGGTGGGAATATCTTGTTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCGCAGCTTACCAGGACCATGTCAAAGCGTAACACGTTCATTGGAACACCTCATTGGATGGCTCCGGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTAGACGTATGGGCTCTTGGTGTGTCTGCAATTGAAATGGCTGAGGGCCTTCCTCCAAGATCAGCAGTCCATCCAATGAGGGTTCTATTCATGATATCCATTGAGCCAGCACCAATGCTTGAGGATAAAGAAAAATGGTCTCTATATTTTCATGATTTTGTTGCTAAGTGCCTTACCAAAGAACCTCGTTTACGCCCCACTGCATCAGAGATGTTGAAGCACAAATTCTTTGACAAATGGAAAACTGGATCAACAGCCATGATGCCAAAAATTGAAAAGGCTAGGCAAATCAGGAAGTCAATGGCTTTGCAAGCACAAACTGTTGCTCCAGCTGCATTAGAAAATCAGCCAAATGAGCAAAAACTGAATGATGACTATGGAGATACTGTTCCATCAAGACCACAAAAAATTGGGGTTCAAGGGACAGGCGATATCTCTTCAGATAGAACTCTGAGGAACCTGAATAGGTTGGAAACTGCGGAATTGAGTGAAGGTAATTTTGGCACTGTAGTAGTCCATGGAGATGAAGTTGATATGGCGGCAGTTAGGTCACAGGGTGCAGATAATGCAGATTCCTCTGCTTCCTTAACTAGTGGAACGGGAAGCAGATTGGCAGATTCTTGGGTTGACAGTCAAAAAGTTGCTGTCTCAAACAATGCCTCTGTTGGAGAATTGGATCCTCATACTCATACCATAAAATCACCTTTATCTCCTGTTAGCGCCCCTGAGCAGAAACTCAAAGGAAAAGGTGATTCTGAAGCACGAGTTGGAGTCAGCAGCAATGTAAGCAATAGTACTTTGAAGAATGAAGCAGTTAGCCGTAAAGCATTTGCTTTGCAGGATAAGCTCTGGTCCATTTATGCAGCTGGTAATACTGTACCTATTCCATTCTTAAGGGCAACAGATATATCACCTATAGCTCTCCTGTCGGATAATGTGCTTGGTGGTATGCAACAAGATATTACTGGCACCGCAACTGTAGAAGCATTGCAGGAGCTTTTTAGTGGTGATGGACAGTCGAAAAGGGGACGCCGAGGACAAATTGAGATGCCTGTTCCTCCGAGCATATACCAAAGACTGACATCAAGTTCTACTCTGTTGAATTTGGCACAGGCTCTAGCTTACCACAAGATGTGTTATGAAGATATGCCACTGCAGGAGCTCCAAGCAACCCAAGAACAGCAGACTATTCAAAATCTATGTGATACTCTTCGTACTATTCTTCGCTTGTAG 2553 0.4696 MDQSAFSFRTRKARPKSELYSTVVVHDDYEDDGDGGYDKREQSRGRRNAKSSGPEDDPYATMVYKYNGNEEDEDDDSSLPPLLKRLPKDFGGGASMDYEDDPDDDAGDFGTMIVKTDRSRQGNRSSSSLSSPMDSTWKSWKSPLRQASPMTGLGVGEDEDDDGGEGFSTFVVRSTARSCERESISGTVVRRTSCGVGSGGAGTGSTMERAVASMQASCELGFGKQRRGSGPLQNDEGRQSLATKVSSSSIPESVTREDPTTKYELLNELGKGSYGSVYKARDLKTSELVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTASEMLKHKFFDKWKTGSTAMMPKIEKARQIRKSMALQAQTVAPAALENQPNEQKLNDDYGDTVPSRPQKIGVQGTGDISSDRTLRNLNRLETAELSEGNFGTVVVHGDEVDMAAVRSQGADNADSSASLTSGTGSRLADSWVDSQKVAVSNNASVGELDPHTHTIKSPLSPVSAPEQKLKGKGDSEARVGVSSNVSNSTLKNEAVSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQQDITGTATVEALQELFSGDGQSKRGRRGQIEMPVPPSIYQRLTSSSTLLNLAQALAYHKMCYEDMPLQELQATQEQQTIQNLCDTLRTILRL 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1838 850 MobiDBLite consensus disorder prediction 659 697 - -
Dere09g1838 850 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 245 559 - -
Dere09g1838 850 Pfam Protein kinase domain 263 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1838 850 MobiDBLite consensus disorder prediction 222 259 - -
Dere09g1838 850 FunFam serine/threonine-protein kinase dst1 isoform X1 260 551 - -
Dere09g1838 850 FunFam Aurora kinase A 255 344 - -
Dere09g1838 850 MobiDBLite consensus disorder prediction 232 256 - -
Dere09g1838 850 ProSiteProfiles Protein kinase domain profile. 263 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1838 850 MobiDBLite consensus disorder prediction 549 565 - -
Dere09g1838 850 MobiDBLite consensus disorder prediction 116 146 - -
Dere09g1838 850 SMART serkin_6 263 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1838 850 MobiDBLite consensus disorder prediction 1 167 - -
Dere09g1838 850 CDD STKc_MAP4K3_like 262 517 - -
Dere09g1838 850 MobiDBLite consensus disorder prediction 7 53 - -
Dere09g1838 850 ProSitePatterns Protein kinases ATP-binding region signature. 269 292 IPR017441 GO:0005524
Dere09g1838 850 MobiDBLite consensus disorder prediction 549 587 - -
Dere09g1838 850 Gene3D Transferase(Phosphotransferase) domain 1 259 555 - -
Dere09g1838 850 SUPERFAMILY Protein kinase-like (PK-like) 243 533 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1838 Dere-ChrDere09 24083397 24100297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1838 1 850 MAP Kinase Kinase Kinase Kinase AT1G69220 60.669 0.0 902
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Dere09g1838 Pkinase 1.7e-69 CL0016