Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1828 ATGGAAGAAATACAAGGCCACGTTTATCCTTCCAGTCAACCTGAATCTACCTTATCTTATGATAGTGGTGCGAGGTCTAACTTCAATGGGCAGGTGAATCGTGGATCTAACATAACAGGGCTGAAGAAGAGAGGTCATGGAACTCGTTCTTGGATAAAAATTTATCAGGATGGAAATTCAAAGACTGTGACACTTGACAAGGCTACTATTATGAGATGTTGTTCTTTGCCATCCAGAGATCTCCGACTGTTGGATCCTATGTTCATTTATCCTTCTACCATATTAGGACGGGAGAAGGCTATTGTAGTCAACCTTGAGCAAATCCGGTGTATAATAACTGCTGATGAGGTTTTTCTGATGAATTCCTTGGATGGAAGTGTTAATCAGTACAAGGTAGAATTGTGCAATCGGCTTCAAAAAGAAAAATCTGATGATTTACCTTTTGAGTTCAAGGCATTGGAGCTGGCTTTGGAGTTGACATGTTTATCTTTGGATGCTCAGGTGAAAGAACTGGAAATGGAAATATATCCAGTGCTAGATGAGCTAGCCTCTTCTATCAGCACACTTAATCTAGAACGGGTTCGAAGATTTAAAGGCCACCTTCTTGCTTTGACACAACGAGTTCAAAAGGTTCGTGATGAAATAGAACATCTCATGGATGACGATGGGGACATGGCTGAGATGTGCCTGACTGAGAAGAAGATCAGATCAGAATCTTACCCTTTAAATGACCTTTTCCTTCAGACTCATATGTCAGGAACTGGAAGAGTGATTTCAAAATCAGCTCCTGCTTCACCAGAGCGGACCATAAGTGGAGCTGAAATGTTGCAAAGGGCATTCAGCAGCATTGGAAATTTGAGTAAACATGGCAGTTTAACTGGTTCATCTAATAATGGGGAAAAGATTGAGCCACTGGAAATGTTGCTTGAAGCATATTTTATTGTCATTGATAACACTCTTAATAACTTATTGTCGCTCAAAGAATATATTGATGACACTGAAGATTTTATCAACATAAAATTGGGAAATATTCAGAACCATCTAATACAATTTGAGTTGCTTCTCACAGCAGCTACATTGTTAGCTACAGTATTTGCTGCTGTGACGGCAGTTTTTGGAATGAACTTTGAAACTACAGTATTTGACCACCCATCTGGATTCCACTGGGTTTTAGTAGTTACTGGAATTGCTTGTGCATTCTTGTACTTCTCCTTCCTTTTCTATTTTAAGAGCAAGAAAGTGCTTCCAGCATAA 1254 0.3947 MEEIQGHVYPSSQPESTLSYDSGARSNFNGQVNRGSNITGLKKRGHGTRSWIKIYQDGNSKTVTLDKATIMRCCSLPSRDLRLLDPMFIYPSTILGREKAIVVNLEQIRCIITADEVFLMNSLDGSVNQYKVELCNRLQKEKSDDLPFEFKALELALELTCLSLDAQVKELEMEIYPVLDELASSISTLNLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKKIRSESYPLNDLFLQTHMSGTGRVISKSAPASPERTISGAEMLQRAFSSIGNLSKHGSLTGSSNNGEKIEPLEMLLEAYFIVIDNTLNNLLSLKEYIDDTEDFINIKLGNIQNHLIQFELLLTAATLLATVFAAVTAVFGMNFETTVFDHPSGFHWVLVVTGIACAFLYFSFLFYFKSKKVLPA 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1828 417 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 27 415 IPR039204 -
Dere09g1828 417 Gene3D Magnesium transport protein CorA, transmembrane region 125 348 - -
Dere09g1828 417 CDD Mrs2_Mfm1p-like 51 399 IPR039204 -
Dere09g1828 417 Gene3D Magnesium transport protein CorA, transmembrane region 355 414 - -
Dere09g1828 417 MobiDBLite consensus disorder prediction 1 44 - -
Dere09g1828 417 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 354 406 IPR045863 -
Dere09g1828 417 FunFam Magnesium transporter MRS2-1 39 122 - -
Dere09g1828 417 Coils Coil 201 221 - -
Dere09g1828 417 MobiDBLite consensus disorder prediction 9 38 - -
Dere09g1828 417 Gene3D - 38 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1828 Dere-ChrDere09 23972399 23974925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1828 11 416 MRS2 Gene Family AT2G03620 65.860 2.68e-180 507