Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1811 ATGTCTCAGCCTCAGCCCCAGTTTCAATTTGGCCTCACAGATTTGGAAGCAATTGAAAATTTGATAAGGATAACAAGTGGTCTTCGTCTTCCCGGTGATATATGCACTGACAGGAACCCCTACACATTGGACCCTCCTCTTCTACCATTTCAGTTGAAGGTTACAGACGCATGGGCTTTGTATTCTGCAGATTCGTTCTATTCTAATGGAGTTACCAAGAGCATAGGATATTTCTTCATGATTGCGGAGTATGATTTGTCAGAGAGAAGACACTTTGTTCATTCTACTCCGTGTGGTTGCTGGTTTTATATTGGAAGAGAAGTGCCAATTTTTCACCATGATGAAGTCCTGGGGTTCAAAAAAGATTTTCTCTTTTATTGGAGCACTGGCCCGAAGTCTTTCTCCATAGGTGCACCACAAGATATGGTGCAATGCAAGTGGCATGCAACGGAGTATAGGCTCAATGCAACAGTACTCCTTCCACCGGGACCAGCTTCAGACTCGCTTCTTTCCAAGGTTGACACTCAGTCTTTAGTACAGATTCCTAGCTCTTCATTATCTCATCATTTTAATCATGATGAAGAGGGCATTAATGATCAGAATCAGACGCTTCTAGCTGAAAGTGGGACTGATGAATAA 639 0.4272 MSQPQPQFQFGLTDLEAIENLIRITSGLRLPGDICTDRNPYTLDPPLLPFQLKVTDAWALYSADSFYSNGVTKSIGYFFMIAEYDLSERRHFVHSTPCGCWFYIGREVPIFHHDEVLGFKKDFLFYWSTGPKSFSIGAPQDMVQCKWHATEYRLNATVLLPPGPASDSLLSKVDTQSLVQIPSSSLSHHFNHDEEGINDQNQTLLAESGTDE 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1811 212 SUPERFAMILY NAC domain 8 158 IPR036093 GO:0003677|GO:0006355
Dere09g1811 212 ProSiteProfiles NAC domain profile. 4 176 IPR003441 GO:0003677|GO:0006355
Dere09g1811 212 Gene3D NAC domain 13 185 IPR036093 GO:0003677|GO:0006355
Dere09g1811 212 Pfam No apical meristem (NAM) protein 6 154 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1811 Dere-ChrDere09 23355091 23358657 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1811 2 159 NAC Transcription Factor Family AT5G09330 27.044 1.22e-07 49.7