Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1808 ATGGAAGACAAAGACAAAGCAGCATCATCCCGCCCCGCAATATCTCCGACTGATTTCACCACTGATTCCTCCAGCTGGGCGCTCAGGCCCGATGACTGTGACGGCGTCTATTTCTTCTCCGGTGACCGAGACACCAGCAGCATACTCAGCGAGTTTGGGTGGAATCTCGACCCGGAGCAACCACACCGGATCGGTGTCGACGATACGTCTGATTTGGCGGGGGGAGAAGGCGGAGTGGGAGGAGGATTGTGGTTCCCGGCTCACTCTGCTCCGAGTAGCTCGACGGAACCGGCTGATAAGGCGACGGCATCCGTTGTGTCCCCATCGAATAATCAGTCGGTATCTTCGAGCTCCAGCGAGGATCCACAGGAGAAGTCTAACGTCTCAGACGAAAAGCCGCCGGAGATACCGAGTAAAAGTAAAAAGAAGGGGCAAAAGCGAATACGGCAGCCGCGGTTTGCATTTATGACCAAGAGTGAAGTCGAACATCTTGAGGATGGCTACAGATGGCGAAAGTATGGTCAAAAGGCAGTAAAAAATAGTCCATTTCCTAGGAGCTACTATCGTTGCACAAATAGCAAATGCACGGTGAAGAAAAGGGTAGAACGTTCCTCAGAGGACCCAACCATTGTCATAACTACATACGAAGGTCAACACTGTCATCACACTGTTGGGTTCCCTCGAGCAGGATCAGGAATCCTGAGCCATCATGAAGCTGCTGCCTTCGCCGCCGCAACCGGCCAATTAACTCCTACAATGTCACAGTTCTATTATCCGATCCAATTACCAAGAGAAAACACTAGTCTTAATATTTCCCAGGCTCCTCAGCACCACCAGCAAGCACAGCATGAACAAGCTGGAGGATCATCCAGCACAGTAATAATGCCAGATGATGCAGCCTCCCAGCTTCCCACTGATGAAGGACTTCTCGGAGACATTGTGCCCCCTGGGATGCGTAACCGATGA 966 0.5176 MEDKDKAASSRPAISPTDFTTDSSSWALRPDDCDGVYFFSGDRDTSSILSEFGWNLDPEQPHRIGVDDTSDLAGGEGGVGGGLWFPAHSAPSSSTEPADKATASVVSPSNNQSVSSSSSEDPQEKSNVSDEKPPEIPSKSKKKGQKRIRQPRFAFMTKSEVEHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRAGSGILSHHEAAAFAAATGQLTPTMSQFYYPIQLPRENTSLNISQAPQHHQQAQHEQAGGSSSTVIMPDDAASQLPTDEGLLGDIVPPGMRNR 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1808 321 MobiDBLite consensus disorder prediction 273 321 - -
Dere09g1808 321 MobiDBLite consensus disorder prediction 88 123 - -
Dere09g1808 321 SMART WRKY_cls 164 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere09g1808 321 MobiDBLite consensus disorder prediction 1 26 - -
Dere09g1808 321 ProSiteProfiles WRKY domain profile. 159 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere09g1808 321 SUPERFAMILY WRKY DNA-binding domain 156 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere09g1808 321 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 61 279 IPR044810 GO:0003700
Dere09g1808 321 FunFam WRKY transcription factor 57 150 224 - -
Dere09g1808 321 Gene3D WRKY domain 151 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere09g1808 321 MobiDBLite consensus disorder prediction 124 141 - -
Dere09g1808 321 Pfam WRKY DNA -binding domain 165 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere09g1808 321 MobiDBLite consensus disorder prediction 273 298 - -
Dere09g1808 321 MobiDBLite consensus disorder prediction 55 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1808 Dere-ChrDere09 23270425 23273667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1808 18 320 WRKY Transcription Factor Family AT1G69310 50.160 6.91e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere09g1808 WRKY 2.1e-25 CL0274