Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1772 ATGGAAGAGACAGACGAGTCCAATGCTAACAAGAAGCTCATAACCAAAAGAAGGAGCTTCAGGGGCGGAGCCAACTCTCATGAGCATCATCACTATCATCAGAGTCAGCTGCTACAACAATACTCGACTCAGTTTGGGTTCTGCAACCAGAAGGAGTATCAGAGGTACTACCCGGCTCTTCTTCCTCTACCTTCTCTTATACCTCTGCAACTAGCTTTGACGCCACCGTTCCCTCGAAACCAGACCATCAAATCAAAAACCCATTCACAGAAATCTCCATGCAATCTGAATAATTTTCCCTTTGCTGCCTCATCTTATGACAAGGTCTCAGAAGACACAGTTGCTCATGCTCCAAAGGAGCTTCAACAGAAAGCCAAGGCATCCCTTAAGGGAGACGACGGGAAGAAACTTATACTTGCAAGAAAACCACGGGCACTAATTACTGCAAGGAGGCCAGACTCTGGCGGCAAAGAGGGTTCTGTGATCTCTCTCCTTGCCAACCACTTTCTAGTGCAATTTGATTCATCAAAAAAGATATATCATTATAATGTTGAAATTACTCCTAATCCCTCCAAGCAAGTTGCCCGACTAATCAAACAGAAATTGGTTGATGACAATTCTGCTGTGCTTTCTGGTGCCCTACCAGCATATGATGGGCAAAAGAATCTTTACAGCTCAGTTGAATTCCAAAATGATAAGCTTGAATTCTACATAAACCTGCCAATCCCAACAAGCAAGAATTCATTACCTGGTAGAGAAATGTGTGACTTCAAAGAGAAGCAGGAACAGCTTAAACTGTTCCGATTAAATATCAAACTTGTCTCTAAGATTAATGGGAAGGAGTTGGCATACTACTTGAGCAAAGAGGGAGATGATTGGATTCCACTTCCGCAGGATTATCTCCATGCTTTGGATGTTGTTCTGAGAGAGAGTCCAACTGAGAAGTGTATACCTGCAGGGAGGTCATTCTATTCAACTTCAATGGGAAGAACCAAAGAGATTGGGGGAGGAGCTGTTGGATTGAGAGGGTTCTTTCAGAGTCTTCGACCAACCCAACAAGGACTCGCCCTTAATGTTGATTTCTCGGTAACTGCTTTCCATGAGAGCATAGGAGTGATTCCTTACTTGCAGAAGCGTCTTGAGTTCCTTCGAGATCTTTCTCAGAGGAAGACAGCAAGTTTAACCGGTGAAGAGAGGAAGGAAGTGGAGAAGGCATTGAAGAATATCAGGGTCTTTGTTTGCCACAGAGAAACTGTACAGAGATATCGTGTCTATGGCTTAACTGAGGAGGCTACTGAAAATCTTTGGTTTGCTGACAGGGATGGAAAGAATCTTTGGCTCATGAGTTACTTTAAAGATCACTATAACTATGACATACAATTTAGCAAATTGCCATGCTTGCAAATTAGTAGGAGCAAACCATGTTATCTCCCTATGGAGCTTTGTGTCATCTGTGAAGGCCAGAAGTTCCTTGGAAAGCTATCTGATGATCAGACTGCAAGAATACTCAAGATGGGCTGCCAAAGACCAAGGGAACGAAAAGCCATCATCGAAGGAGTCATGAGAGGGCCCGTTGGGGCAACCAGTGGCACCCAGGAAAGAGAATTCAAACTCCAAGTGTCAAAAGAAATGACACGTTTGACTGGAAGAATTCTTCACCCTCCCAAGCTAAAGCTTGGAGATGGAGGTCATGTGACAAAGCTAATTCCTTCACGTCATGACCGCCAGTGGAACCTTCTGGATGGTCATGTCTTTGAAGGAACTAAAATTGAACGGTGGGCACTAATAGGTTTTGGCGGTACACCTGAGCAGAAGTCCAATATCCCTAGATTTATAAATCAGCTATCTCAGAGGTGTGGAGAAATGGGCATTTTTTTCAACAAGAACACAATTACTAGCCCCTATTTTGAATCAGCCCAGGTGCTTAATAATGTCACCCTTCTGGAATCCAAGCTCAAGAAAATCCAGAGAACTGCCTCAAACAATCTACAGCTGCTTATTTGTGTTATGGAGAGAAAACACAAGGGATATGCAGACTTGAAACGAATTGCAGAGACAAGCATTGGGGTTATGAGCCAATGCTGCTTGTATCCAAATCTCAGCAAATTAACTTCACAATTTTTGGCAAATTTGGCCCTCAAAATCAATGCCAAAGTTGGTGGATGCACTGTTGCCCTGTACAATTCACTGCCCTCTCAAATTCCACGACTCTTTCAGTATGATGAGCCAGTGATATTTATGGGTGCTGATGTTACTCATCCTCATCCTCTTGATGATCATAGTCCATCTGTTGCTGCTGTTGTTGGTAGCATGAATTGGCCAACTGCAAACAAATATATTTCACAGATAAGGTCTCAAACACATCGACAAGAAATCATCCAGGATCTTGGTTCAATGGTGAAGGAGTTACTAGATGATTTTTATCAGGAGGTCAAGAAACTACCCGGGAGAATAATTTTCTTTAGAGATGGGGTTAGTGAAACCCAGTTTTATAAAGTGCTGCAGGATGAACTGCAATCCATCAAAAGGGCGTGTTCCAGATTTCCTGGTTATAAACCATTCATTACTTTTGCAGTAGTACAAAAGAGACATCACACGAGATTGTTTCCCTTTGAAACCGAACAGTCTTCCATGCAAAACTATTTTTGTTATGAGAATATTCCCCCAGGGACTGTGGTTGACTCTGTGATCACTCATCCAAGGGAGTTTGATTTTTATCTTTGTAGCCACTGGGGCATGAAAGGAACAAGCAGGCCGACTCATTACCACGTTTTGTGGGATGAAAATCAGTTTACTTCTGATGAACTCCAGAGGCTGGTTTACAACCTATGCTATACTTTTGTTAGGTGCACCAAGCCAATTTCATTGGTTCCTCCTGCTTATTATGCCCATTTAGCTGCATACAGAGGCAGACTCTACCTCGACCGATCAGAATCCTCAGCTTTATTTAAAAGTACCTCTACGTTATCCAGAGCTGCACCTCCAAAGACAGCACCTCTACCAAAACTTAGTGAGAATATTAAGAAGCTCATGTTCTACTGCTAA 3045 0.4282 MEETDESNANKKLITKRRSFRGGANSHEHHHYHQSQLLQQYSTQFGFCNQKEYQRYYPALLPLPSLIPLQLALTPPFPRNQTIKSKTHSQKSPCNLNNFPFAASSYDKVSEDTVAHAPKELQQKAKASLKGDDGKKLILARKPRALITARRPDSGGKEGSVISLLANHFLVQFDSSKKIYHYNVEITPNPSKQVARLIKQKLVDDNSAVLSGALPAYDGQKNLYSSVEFQNDKLEFYINLPIPTSKNSLPGREMCDFKEKQEQLKLFRLNIKLVSKINGKELAYYLSKEGDDWIPLPQDYLHALDVVLRESPTEKCIPAGRSFYSTSMGRTKEIGGGAVGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTASLTGEERKEVEKALKNIRVFVCHRETVQRYRVYGLTEEATENLWFADRDGKNLWLMSYFKDHYNYDIQFSKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTARILKMGCQRPRERKAIIEGVMRGPVGATSGTQEREFKLQVSKEMTRLTGRILHPPKLKLGDGGHVTKLIPSRHDRQWNLLDGHVFEGTKIERWALIGFGGTPEQKSNIPRFINQLSQRCGEMGIFFNKNTITSPYFESAQVLNNVTLLESKLKKIQRTASNNLQLLICVMERKHKGYADLKRIAETSIGVMSQCCLYPNLSKLTSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFQYDEPVIFMGADVTHPHPLDDHSPSVAAVVGSMNWPTANKYISQIRSQTHRQEIIQDLGSMVKELLDDFYQEVKKLPGRIIFFRDGVSETQFYKVLQDELQSIKRACSRFPGYKPFITFAVVQKRHHTRLFPFETEQSSMQNYFCYENIPPGTVVDSVITHPREFDFYLCSHWGMKGTSRPTHYHVLWDENQFTSDELQRLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLDRSESSALFKSTSTLSRAAPPKTAPLPKLSENIKKLMFYC 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1772 1014 CDD Piwi_ago-like 534 974 IPR045246 -
Dere09g1772 1014 Pfam PAZ domain 380 502 IPR003100 GO:0005515
Dere09g1772 1014 Pfam N-terminal domain of argonaute 162 308 IPR032474 -
Dere09g1772 1014 FunFam protein argonaute 10-like 733 1014 - -
Dere09g1772 1014 Gene3D - 737 1014 IPR036397 GO:0003676
Dere09g1772 1014 Gene3D paz domain 363 490 - -
Dere09g1772 1014 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 142 976 - -
Dere09g1772 1014 Pfam Piwi domain 666 971 IPR003165 GO:0003676
Dere09g1772 1014 CDD PAZ_argonaute_like 380 485 - -
Dere09g1772 1014 SMART PAZ_2_a_3 377 517 IPR003100 GO:0005515
Dere09g1772 1014 SMART Piwi_a_2 665 975 IPR003165 GO:0003676
Dere09g1772 1014 ProSiteProfiles Piwi domain profile. 665 975 IPR003165 GO:0003676
Dere09g1772 1014 SMART DUF1785_2 317 369 IPR014811 -
Dere09g1772 1014 ProSiteProfiles PAZ domain profile. 377 486 IPR003100 GO:0005515
Dere09g1772 1014 Pfam Argonaute linker 1 domain 319 367 IPR014811 -
Dere09g1772 1014 FunFam Argonaute 10 551 727 - -
Dere09g1772 1014 FunFam Protein argonaute 7 364 490 - -
Dere09g1772 1014 Gene3D - 551 727 - -
Dere09g1772 1014 SUPERFAMILY Ribonuclease H-like 650 975 IPR012337 -
Dere09g1772 1014 SUPERFAMILY PAZ domain 364 522 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1772 Dere-ChrDere09 22753701 22757231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1772 156 1014 Eukaryotic Initiation Factors Gene Family AT1G48410 41.229 0.0 639