Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1768 ATGAGCTCCGGCAACTCCGACTCGGGTGCTGATTCATCCGGCGGCTGCACGTCCGGGCCGGACAAGGACAAGCAGAAGGAGAAGGCCAGAGTGAGTCGCACCTCGTTGATCCTGTGGCATGCACATCAGAACGATGTCGCCGCTGTTCGCAAGCTTCTGCAGGAGGATCCGTCGCTGGTGAAGGCCAGAGACTATGACAATCGCACTCCGCTTCACGTGGCGTCCCTCCATGGCTGGGTCGATGTTGCTAAGTGCTTGATTGAACATGGTGCCGATGTCAACGCCCAGGATCGCTGGAAAAACACTCCTCTGGCTGATGCAGAAGGAGCTCAAAGACATACCATGATGGAGCTTTTGAAATCTCATGGAGGCTTGTCTTATGGCCAAAATGGAAGCCATTTTGAATCAAAGCCCGTTCCTCCTCCATTGCCTAACAAGTGTGATTGGGAAATAGACCCTTCTGAGCTGGACTTCACAGGTTCAGTTCGCATTGGAAAGGGATCTTTTGGTGAAATTTTGAAAGCTCATTGGCGTGGAACACCAGTTGCTGTCAAACGCATTATTCCATCTCTCTCGGATGATAGATTGGTTATCCAGGACTTTAGGCATGAGGTTAATTTGCTAGTGAAGCTTCGACACCCTAATATAGTCCAGTTTCTTGGAGCTGTAACTGATAAGAAGCCCCTTATGTTAATTACTGAGTATCTAAGAGGGGGTGATCTTCATCAGTATCTCAAAGAAAAAGGGGCGCTCAGTTCTGCAACAGCTATCAACTTTGCCTTGGATATTGCCAGAGGGATGGCTTATCTTCATAATGAACCAAATGTAATAATTCATCGAGATCTAAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGTGCCGACCACTTAAAAGTTGGAGATTTTGGACTGAGTAAACTTATCAAGGTCCAGAATTCTCATGATGTTTACAAGATGACTGGTGAAACAGGAAGCTACCGCTATATGGCTCCTGAAGTTTTCAAACATCGGAGGTATGATAAGAAGGTTGATGTCTTCTCCTTTGCAATGATTCTGTATGAGATGCTTGAAGGGGAACCACCTTTTGCAAGTTATGAACCTTATGATGGAGCCAAACATGTGGCAGAAGGACACAGGCCGACTATTCGTGCAAAGGGTTATATCCCTGAACTGCAACAATTAACCGAGCAGTGTTGGGATGCTGATATGAATCGAAGACCTTCCTTCTTGGAGATCCTCAAACGACTTGAAAAGATGAAGGAAATTTTACCTACAGATCATCACTGGCACTTATTCACTTCCTAG 1305 0.4598 MSSGNSDSGADSSGGCTSGPDKDKQKEKARVSRTSLILWHAHQNDVAAVRKLLQEDPSLVKARDYDNRTPLHVASLHGWVDVAKCLIEHGADVNAQDRWKNTPLADAEGAQRHTMMELLKSHGGLSYGQNGSHFESKPVPPPLPNKCDWEIDPSELDFTGSVRIGKGSFGEILKAHWRGTPVAVKRIIPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTDKKPLMLITEYLRGGDLHQYLKEKGALSSATAINFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPPFASYEPYDGAKHVAEGHRPTIRAKGYIPELQQLTEQCWDADMNRRPSFLEILKRLEKMKEILPTDHHWHLFTS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1768 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Dere09g1768 434 SUPERFAMILY Ankyrin repeat 35 123 IPR036770 -
Dere09g1768 434 PIRSF ILK 1 434 - -
Dere09g1768 434 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 75 419 - -
Dere09g1768 434 SMART ANK_2a 66 95 IPR002110 GO:0005515
Dere09g1768 434 CDD STKc_MAP3K-like 164 416 - -
Dere09g1768 434 SMART serkin_6 158 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1768 434 SUPERFAMILY Protein kinase-like (PK-like) 147 429 IPR011009 -
Dere09g1768 434 ProSiteProfiles Ankyrin repeat region circular profile. 66 98 - -
Dere09g1768 434 PRINTS Tyrosine kinase catalytic domain signature 233 246 IPR001245 GO:0004672|GO:0006468
Dere09g1768 434 PRINTS Tyrosine kinase catalytic domain signature 271 289 IPR001245 GO:0004672|GO:0006468
Dere09g1768 434 PRINTS Tyrosine kinase catalytic domain signature 387 409 IPR001245 GO:0004672|GO:0006468
Dere09g1768 434 Gene3D - 8 131 IPR036770 -
Dere09g1768 434 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Dere09g1768 434 MobiDBLite consensus disorder prediction 1 29 - -
Dere09g1768 434 MobiDBLite consensus disorder prediction 1 19 - -
Dere09g1768 434 FunFam Integrin-linked protein kinase family 237 432 - -
Dere09g1768 434 Gene3D Transferase(Phosphotransferase) domain 1 238 428 - -
Dere09g1768 434 Pfam Ankyrin repeats (3 copies) 33 97 IPR002110 GO:0005515
Dere09g1768 434 Gene3D Phosphorylase Kinase; domain 1 142 237 - -
Dere09g1768 434 Pfam Protein tyrosine and serine/threonine kinase 163 416 IPR001245 GO:0004672|GO:0006468
Dere09g1768 434 FunFam serine/threonine-protein kinase STY46-like 151 237 - -
Dere09g1768 434 ProSitePatterns Protein kinases ATP-binding region signature. 164 185 IPR017441 GO:0005524
Dere09g1768 434 ProSiteProfiles Protein kinase domain profile. 158 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1768 Dere-ChrDere09 22690272 22696951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1768 2 434 MAP Kinase Kinase Kinase AT1G14000 82.719 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Dere09g1768 PK_Tyr_Ser-Thr 1.1e-63 CL0016