Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1752 ATGTACTATAAAAATGGAATAAAAAGTCGTCTGATCATCCAATCAAACCTTGGCAACTCCAGAAGACGACAAAAGCCCTCGAAGATAAAAGCAGCATCCATCTCCTTGCAAACATTTCAAACGCCTTGGTTTCTCTCTAAGCCTATCCAAGTTTTCTTCATATCCTTCTCCCTTCCTCGTCCCCATTTCAACAAAACAAGGCTTTCTCTAACCTACCCTATAGTTTGCATTCCAACTGTTCGATATTCTTCCTCTGAGAACCAAAAATTAATGGAGGGCCAAACAGCAAGCTCTGGACTACCCCCTGGATTCAGGTTCCACCCAACCGACGAGGAACTAATCGTCCATTACCTTTGTAACCAAGCCACTTCCAAGCCTTGCCCTGCTTCCATCATCCCTGAAGTTGATATCTATAAATTTGATCCTTGGCAATTGCCTGAGAAGGCAGCGTTTGGAGAGAATGAATGGTATTTCTTTAGCCCAAGAGACAGGAAGTACCCAAATGGGGTGAGGCCAAACAGAGCCACTGTGTCTGGGTACTGGAAGGCTACTGGCACAGACAAGGCAATCTTCAGTGGGTCCAAGCATATTGGGGTGAAAAAAGCTTTGGTCTTTTACAAGGGTAGGCCACCGAAGGGTATCAAAACAGAATGGATCATGCACGAGTATCGACTCATTGGTTCAAAAAGACAAGCCAGCAAGCATATTGGGTCCATGAGATTGGATGACTGGGTGCTGTGTAGGATCTACAAGAAGAAGAACATAGCAAAAGCATTGGATCAAAGGGAGGAGGAATACCCAACAACTTCTCAGATGAACATAACAGCAGAAAATGTCAATGACAGTGAACAACAAATGATGAAACTTCCAAGGACTTATTCTCTGACTCATCTTCTGGACATGGATAATTACTTGGCTCCAATCTCACACCTCTTATCTGATGCTTCATATAACTCAACCTTTGACTACCAAATTAATTCTGCTTATGCTGAAAATGTAGTAGACCCATTAGTAAAACCTCAGGTCTTTGAAATGCCTAACCATTGTTATGCACCATCATCGACCAACCAGTATTTGTGA 1080 0.4287 MYYKNGIKSRLIIQSNLGNSRRRQKPSKIKAASISLQTFQTPWFLSKPIQVFFISFSLPRPHFNKTRLSLTYPIVCIPTVRYSSSENQKLMEGQTASSGLPPGFRFHPTDEELIVHYLCNQATSKPCPASIIPEVDIYKFDPWQLPEKAAFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIFSGSKHIGVKKALVFYKGRPPKGIKTEWIMHEYRLIGSKRQASKHIGSMRLDDWVLCRIYKKKNIAKALDQREEEYPTTSQMNITAENVNDSEQQMMKLPRTYSLTHLLDMDNYLAPISHLLSDASYNSTFDYQINSAYAENVVDPLVKPQVFEMPNHCYAPSSTNQYL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1752 359 ProSiteProfiles NAC domain profile. 100 252 IPR003441 GO:0003677|GO:0006355
Dere09g1752 359 FunFam NAC transcription factor 109 256 - -
Dere09g1752 359 Pfam No apical meristem (NAM) protein 101 225 IPR003441 GO:0003677|GO:0006355
Dere09g1752 359 Gene3D NAC domain 109 256 IPR036093 GO:0003677|GO:0006355
Dere09g1752 359 PANTHER NAC TRANSCRIPTION FACTOR 56 100 280 - -
Dere09g1752 359 SUPERFAMILY NAC domain 94 252 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1752 Dere-ChrDere09 22497439 22499007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1752 95 311 NAC Transcription Factor Family AT1G69490 68.584 1.08e-111 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere09g1752 NAM 4.6e-39 No_clan