Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1723 ATGGTGCAGCGTCTGACCTATTGCGAACGCCATAGTGGGAAGCTTGTTTATCAGACCACTAAGAAGAGGGCAAGTGGACCCAAGTGCCCTGTCACTGGCAAGAGGATTCAGGGGATTCCCCACCTAAGGCCTGCAGAGTATAAGAGATCAAGGTTACCTAGGAACCGAAGGACTGTGAACCGTGCATATGGTGGAGTCTTGTCTGGAGGTGCTGTCAGAGAAAGGATTATTCAAGCCTTCTTGGTTGAGGAACAAAAGATTGTGAAAAAGGTCTTGAAGATCCAGAAGGCAAAGGAAAAGCAAGCCTTGAAGGGCTGA 318 0.4874 MVQRLTYCERHSGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIQAFLVEEQKIVKKVLKIQKAKEKQALKG 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1723 105 PRINTS Ribosomal protein L34 signature 51 73 IPR008195 GO:0003735|GO:0005840|GO:0006412
Dere09g1723 105 PRINTS Ribosomal protein L34 signature 29 39 IPR008195 GO:0003735|GO:0005840|GO:0006412
Dere09g1723 105 PRINTS Ribosomal protein L34 signature 11 28 IPR008195 GO:0003735|GO:0005840|GO:0006412
Dere09g1723 105 Gene3D - 24 105 - -
Dere09g1723 105 Pfam Ribosomal protein L34e 9 81 IPR008195 GO:0003735|GO:0005840|GO:0006412
Dere09g1723 105 PANTHER 60S RIBOSOMAL PROTEIN L34 7 101 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1723 Dere-ChrDere09 22162323 22164204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1723 1 104 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 78.151 5.70e-58 172