Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1721 ATGGAAGAGAGAAGTGATTCTGAGAAGCTTGATGAAGTTATGCTTCCAGGGTTCAGGTTTCATCCAACCGATGAGGAGCTTGTTGGGTTTTATCTCAAGAGAAAGATTCAGCAGAGATCTCTCTCTATAGAACTCATAAAGCAGCTTGACATCTATAAGTATGATCCATGGGATCTTCCAAAGTTGGCAAGTACAGGTGAGAAAGAGTGACTACCCTCTCTCACTGACTCCTCTTCTTCTCCAAAAAAGTACATAGAAAGGAGCATCCCTGCTAATGATTCATGGGCAATCTGCAGAATATTCAAGAAAACCAATTCTACAGCTCAAAGAGCTCTCTCTCAGTCCTGGGTCTCTCCCTTACCTTATGAAATGAACACTTCTGAGATGCTGACGAATGATGAAGACACTACCCAGTTTTGTTCAGATCACAGCAACATGTCATTGACAAAGAAAACTAGGTTAGCCAGCCAGTTCTGTACCAACCAAAGTGACCCCATAACCACTAGTACTACTACTGGTAGTACTCTTTGCCCTTTAGATATTGCCTCTTACAAACCCATCATTAACCCATTATTGCTCTACAAACCCTTTGACCAATTACCCATTATTTCAAATAATATAGACCTTATGTCTTCATCATCACCTCATGAACCATCTGGTGCTAAAACTACCAGCATAGATGTTTCTTCCATGTTACTGAGCATGTCATCTTCAGTGCTTGGAGATTTTGGCACTAAGGCTTCCTCAGAGAGTGCAAATTTTGGAGGGTTTCAAGAGCAGTACAGCAGTAACAATGGGTATTCTATAGCTTTGCCATTGATCCAAGATGGGAATGGGTTGGTGAAGATGAATCATCCTAATGTGAATTTGGTGATGCCTAGAGTGGTGGATGGGCAAGATCAGTTGGAGACAGTTGGATCTAATAATAATAATAATAGTTATATGAATGGGTTTGCATTAAGCAGTATCCCTAATTTGAATATTGGGGATGCATGGAAGTCAAACCTGCTTTGGGATAGTTCATCTTGTCCTTGTGATCATGTGCCCTCAACTTATTCCACTACTACCAAGTGCTATACTTAG 1083 0.4081 MEERSDSEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRSLSIELIKQLDIYKYDPWDLPKLASTGEKEXLPSLTDSSSSPKKYIERSIPANDSWAICRIFKKTNSTAQRALSQSWVSPLPYEMNTSEMLTNDEDTTQFCSDHSNMSLTKKTRLASQFCTNQSDPITTSTTTGSTLCPLDIASYKPIINPLLLYKPFDQLPIISNNIDLMSSSSPHEPSGAKTTSIDVSSMLLSMSSSVLGDFGTKASSESANFGGFQEQYSSNNGYSIALPLIQDGNGLVKMNHPNVNLVMPRVVDGQDQLETVGSNNNNNSYMNGFALSSIPNLNIGDAWKSNLLWDSSSCPCDHVPSTYSTTTKCYT 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1721 360 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 70 - -
Dere09g1721 360 SUPERFAMILY NAC domain 13 69 IPR036093 GO:0003677|GO:0006355
Dere09g1721 360 ProSiteProfiles NAC domain profile. 14 157 IPR003441 GO:0003677|GO:0006355
Dere09g1721 360 Pfam No apical meristem (NAM) protein 16 69 IPR003441 GO:0003677|GO:0006355
Dere09g1721 360 Gene3D NAC domain 23 73 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1721 Dere-ChrDere09 22155415 22157239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1721 8 69 NAC Transcription Factor Family AT1G26870 79.032 2.53e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere09g1721 NAM 5.8e-14 No_clan