Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1716 ATGGATATGTCAGAGATTGCCAAGAAGCTCGGACTATCGGATTCCAAACTCGCTGTACGGAAAGCTTCGGAGCTTCGGCGCCTATGCGACGTTCAGTTCGATTCTTCTGTCATAGGAGTTGGGGAGGTTTGCAAAGCTATAATTTGTTTGGAAATTGCCGCCGCGAGGCTGGGGGTTTTGTTTGATCGATCAAATGCCATAAGACTTAGTGGTATGTCGGAAAAGGCATATATCAGATCGTACAATTCGTTGCATAATGGTCTCGGCGTCAAGACGAAGCTGGATGTCCGAGAACTAGCGATTCAATTTGGGTGTGTTCGAATCATTACTTATGTTCAGAATGATTTAAATCTTTATAAGGACCGTTTTCTGTCATCCCTGCCTGCTTCTCGACGTGCAAGTGCTGACTTTACTCGTCCTGTCTTCACTGTTGTTGCTTTTTATTTATGTGCAAAGAAACACAAGCTCAAAGTAGACAAGCTCAAGTTAATTGAACTGTGTGGTACATCTGAATCTGAATTTAGTAGCGTTTATACTTCCATGAAGGACTTATGCCATGACATTTTTGGAGTTGCTAAAGAAAAGAAGGATCCCAGAGAAGTGAAGTCAAATCGAGATCTGTTGGATGTGTTGCCAGAAAAAAGAAGACCTGAAGATGGTGGCTGTTCGTCTGATGAAGGACCAAATCTTTCAAGTTATAAGAAGCGCAAACAGTTGGAAAAGCATGAATATGAGGAGTGGAAATCTTCTGTGCTAGCATCCAAAAGTCAAAACAAGGCAGAAGTTCCTCGCAAGCGAACCAAGCAGACTCGCCTCAACTTTATTAAAGAAGCTCCTAAGACCCAGAAGTTGGAGGCTACATGA 864 0.4282 MDMSEIAKKLGLSDSKLAVRKASELRRLCDVQFDSSVIGVGEVCKAIICLEIAAARLGVLFDRSNAIRLSGMSEKAYIRSYNSLHNGLGVKTKLDVRELAIQFGCVRIITYVQNDLNLYKDRFLSSLPASRRASADFTRPVFTVVAFYLCAKKHKLKVDKLKLIELCGTSESEFSSVYTSMKDLCHDIFGVAKEKKDPREVKSNRDLLDVLPEKRRPEDGGCSSDEGPNLSSYKKRKQLEKHEYEEWKSSVLASKSQNKAEVPRKRTKQTRLNFIKEAPKTQKLEAT 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1716 287 MobiDBLite consensus disorder prediction 200 235 - -
Dere09g1716 287 MobiDBLite consensus disorder prediction 250 287 - -
Dere09g1716 287 CDD Orc6_mid 93 188 - -
Dere09g1716 287 Gene3D - 92 189 - -
Dere09g1716 287 FunFam Origin recognition complex subunit 6 92 188 - -
Dere09g1716 287 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 277 IPR020529 GO:0005664|GO:0006260
Dere09g1716 287 MobiDBLite consensus disorder prediction 200 222 - -
Dere09g1716 287 MobiDBLite consensus disorder prediction 259 273 - -
Dere09g1716 287 Pfam Origin recognition complex subunit 6 (ORC6) 3 92 IPR008721 GO:0003677|GO:0005664|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1716 Dere-ChrDere09 22100754 22103486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1716 1 285 Core DNA Replication Machinery Family AT1G26840 65.263 3.46e-132 374