Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1701 ATGTTGAGCTCTAGAATCCTGTTTTGGATCAAGGGTTGCATTTGTCTGGTGTTTATTTCTGCAATTTCTGGGGTTTTTTCTCTGGAACCCGAACTTGGATCCACTCGTGTCGTCTTTCAGACGAATTATGGGGATATTGAATTCGGTTTCTTTCCCACTGTGGCACCCAAAACCGTTGATCACATTTTTAAACTTGTGCGACTTGGATGCTATAATACAAATCATTTCTTTCGGGTAGATAAGGGCTTTGTGGCCCAAGTAGCAGATGTTATGGGTGGGAGATCCGCTCCTATGAATGAAGAACAAAGAATGGAAGCTAAAAAGACTGTTGTTGGTGAATTTAGTGAAGTCAAACATGTTAGAGGAATTCTTTCTATGGGAAGGCATAGTGATCCAGACAGTGGTGGATCCTCATTTTCAATGCTTTTGGGAGATGCTCCTCATCTTGATGGTCAGTATGCAATATTCGGAAAAGTCACTAAAGGTGATGATACATTGAAAAAGCTCGAGCAACTACCTACCCGTAGAGAGGGAATTTTTGTAATGCCAACGGAGCGAATCTCTATTCTGTCATCTTATTACTATGACACAGAAAGTGAGGATTGTGAACGAGACAGATCAATATTGAAGCGCAGGCTAGCTGCTTCAGCTGTTGAAATTGAAAGACAGAGGATGAAATGCTTCCCCTGA 690 0.4159 MLSSRILFWIKGCICLVFISAISGVFSLEPELGSTRVVFQTNYGDIEFGFFPTVAPKTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVMGGRSAPMNEEQRMEAKKTVVGEFSEVKHVRGILSMGRHSDPDSGGSSFSMLLGDAPHLDGQYAIFGKVTKGDDTLKKLEQLPTRREGIFVMPTERISILSSYYYDTESEDCERDRSILKRRLAASAVEIERQRMKCFP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1701 229 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 37 190 IPR002130 GO:0000413|GO:0003755
Dere09g1701 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 50 65 IPR002130 GO:0000413|GO:0003755
Dere09g1701 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 IPR002130 GO:0000413|GO:0003755
Dere09g1701 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 151 166 IPR002130 GO:0000413|GO:0003755
Dere09g1701 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 88 IPR002130 GO:0000413|GO:0003755
Dere09g1701 229 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 38 194 IPR002130 GO:0000413|GO:0003755
Dere09g1701 229 Gene3D - 27 203 IPR029000 -
Dere09g1701 229 CDD cyclophilin 38 191 - -
Dere09g1701 229 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 9 229 IPR044233 -
Dere09g1701 229 SUPERFAMILY Cyclophilin-like 36 197 IPR029000 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1701 37 192 U-box Gene Family AT5G67530 29.878 2.16e-11 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1701 09 21900021 21904255 Dere09g1701 09 21900021 21904255 ECH