Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1691 ATGACTACTGCTGCATGTTCAACTTGTCCATCTTCTTCATCCTTCCCAGTATATCTGGTGCTTCTTCTTCTTATTCTGTCTTCCCAGGTTTGCTCCAGTTCTGCAGTCTCTCGTTCAACTGTTAAGTTTCTTCCTGGGTTTCAAGGGTCTCTTCCTTTCCATCTTGAAACTGGGTATGTGGGAGTTGGTGAATCAAAGGAAGTACAGCTCTTCTACTACTTTGTCAGATCAGAGAGGAATCCTGAACAGGACCCTATCATGCTTTGGCTGACTGGGGGTCCAGGTTGCTCTGCCTTATCTGCTCTTGTCTTTGAAATAGGTCCAATTCAGTTTAGGGTGGAGGAATATAATGGTAGTCTTCCTACACTTGTATTAAATACACACTCATGGACTAAGTGGTTGATTGATCATCCAGAATTTCTCTCAAACTCAGTATACATTGGCGGGGACTCATATTCTGGGATAATTGTCCCTGGAGTGGCTCTTAAAATTCTTGAAGGCAACGAGGACAGCATAGAGCCTACAATCAATTTCGAGTCATTGAAAAGCAGTTGTGGAGGGGAGTATCACAATGTAGATCCTAGTAATGAAATGTGTGCCAGATATATTGCTGCCTATGAAAAGTGTGTTTCAGGATTACATAGCCCACATATTTTGGAACCCCATTGTCCCTTTCTATCCCCGAAACCCCATAAGTTCTTTGGCAGAAGATCTTTGGATGAGATGTCTGAATCCTTACTTGCCTCTGCTGACTCTGAACCGTCGCTTCCTACCATAGGGTGTCGAAACTATGAAGCTTTGCTAGCTCATTATTGGGCAAATGATGACACTGTTCACAGGGCCCTTGGCATCCGTCAGGGAAGTATAGGGAAATGGCAGCGATGTATTAAAACACCTTATACCAAAGAGATTGAAAGCAGTGTTCCATTTCATGTGAACTTGAGTGCTAAAGGTTACCGTGCCTTAATATACAGTGGAGATCATGACTTTGTGTTCACGTTTCATGGAACTCAAGCATGGATAAGATCTTTAAACTACTCCATTGTAGATGAGTGGAGGCAATGGTTAGTCCAAGGTCAAGTCGCAGGTTACACAAGGGCATATTCAAATGGGATGACGTTTGCGACTGTTAAGGGTGGAGGGCATACAGCTCCCGAGTACAAACCTAAAGAATGCTTTGCAATGTTTGAGAGGTGGATTTCTCAAAAACCATTGTAA 1218 0.431 MTTAACSTCPSSSSFPVYLVLLLLILSSQVCSSSAVSRSTVKFLPGFQGSLPFHLETGYVGVGESKEVQLFYYFVRSERNPEQDPIMLWLTGGPGCSALSALVFEIGPIQFRVEEYNGSLPTLVLNTHSWTKWLIDHPEFLSNSVYIGGDSYSGIIVPGVALKILEGNEDSIEPTINFESLKSSCGGEYHNVDPSNEMCARYIAAYEKCVSGLHSPHILEPHCPFLSPKPHKFFGRRSLDEMSESLLASADSEPSLPTIGCRNYEALLAHYWANDDTVHRALGIRQGSIGKWQRCIKTPYTKEIESSVPFHVNLSAKGYRALIYSGDHDFVFTFHGTQAWIRSLNYSIVDEWRQWLVQGQVAGYTRAYSNGMTFATVKGGGHTAPEYKPKECFAMFERWISQKPL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1691 405 FunFam Carboxypeptidase 307 402 - -
Dere09g1691 405 Pfam Serine carboxypeptidase 45 132 IPR001563 GO:0004185|GO:0006508
Dere09g1691 405 Pfam Serine carboxypeptidase 178 402 IPR001563 GO:0004185|GO:0006508
Dere09g1691 405 Gene3D alpha/beta hydrolase 182 405 IPR029058 -
Dere09g1691 405 Gene3D alpha/beta hydrolase 132 181 IPR029058 -
Dere09g1691 405 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 178 389 IPR001563 GO:0004185|GO:0006508
Dere09g1691 405 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 158 IPR001563 GO:0004185|GO:0006508
Dere09g1691 405 PRINTS Carboxypeptidase C serine protease (S10) family signature 372 385 IPR001563 GO:0004185|GO:0006508
Dere09g1691 405 SUPERFAMILY alpha/beta-Hydrolases 41 404 IPR029058 -
Dere09g1691 405 Gene3D alpha/beta hydrolase 34 131 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1691 Dere-ChrDere09 21786071 21789160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1691 35 64 Calmodulin-binding Proteins AT2G22960 66.667 1.89e-06 46.2