Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1687 ATGGGAAAAACTCCGGGAAAATGGATAAGGAACTTGTTTTCGGGGAAGAAATCATCAAAATCTAATCCATCAAGCAAAAGGAATATTTTCAAACCTTCAAGCAATCAGGACGTGTTGGTTCCTTCTGAGGCATCTGTGCCTAATATTCCTGTGGATTCTTCTCTGATATCCCCACCCACTGCTGGAGCTAATGCTGCTAAAGAAGTACATTCGGAAAAGGTAGTAGTTAGTGGATCTTCAAATGACATGAATAGTCTTTCAGCTGAGGTGGAAGAGACTGATGCACAAGCTGTTGTTGATTCTGGTTCACTGGATGATGCTGAGAAAATTAGGCTTGCTCAAGCTGCTGTAAAAGCTCAGGCTGCTTTTAGAGGCTATCAGGCTCGTCGGGTATTTCAAACACTAAAAGGTGTCATACAACTGCAAGCTCTTATACGTGGCCACTTGGTGAGAAGGCAAGCTGTTTCTACTTTATACTGTGTGAACAGAATTGTAAAAGTTCAAGCGCTTGTTCGTGGTCGCAAAGTTAGGCATTCTGATATTGGGATTGCAGTCCTCAAAATTTGTAAGGATACTAAATGTTCAAATCCTATTGGTGGAGTAGTTACGACTATGCAGGCAGAGAAGCTGTCAGAAAGTGTCTTTGTTCTAAAGCTTCTGGCTTCGTCATCCTCAACAGTTCCCCTGCATATCAATTTTGATCCTGGAGAGCCGAACTTTGCTTGGAAATGGCTTGAGCGATGGACAAGGTCTCACTTTTGGGCACCTCTTCCCAAATCAAAAAAGAAACTTGACTTAAAGTCTGATGAGAGGAGTGCCAGTTGTCAACCACATGACAATAAAAAGGGCAAAGGTAAAAGAAATGCCCAGAAAGCTCCTGGTGTGAAAATTGATGGTGGTTCATCCTCAGATTCTAACAAACCTAAACAACATCCGAAAAAGGTTTCAAGCCATCCAATGCAGTCATCACAGGAACATTCACAAAAGGAAATAAAAAACAATATTAAGAAAAGTTCAGCGCAGAGTGTTTCTAGTAGATCTGAGGTTGCTACTGAGAAAAGGAAACACATCACTGGAAAAGTTCTGGGTCATAATGTCACTGATGCTCCAGAGCATGGCCCAAGTGTTTCAGCAGAGAAAGTGAAAAATATGGGAATGTCAAAATCAAATCAGTCTGATGTTGAAAAAAGTCTTGGACAGCAAGCAGAAGGTGAGTATGGTGAATCAAATGGTAATCCTATTACTGACTTGCAGACTAGCGTAAACAACGGTAAAGAAGAAGTTATTGGAGGAGCTACTGAGGAATTGAATAGCAATGTGAACCCTAAGAACTCCCTGAGAAGAGCTTCACTGCCCGCCAATTTCAATAATCAAGATAATGGTGCTCATAACACACCAAGACTTCCCAGCTATATGGCCCCTACAGAATCTGCAAAAGCTAAGCTAAGAGCACAAGGCTCCCCTAGGTTTGCCAGTGACTTGGTAGATAAAAATGGTATAACCAGGCGACTTTCACTTTCATCTTCACTAAATGGCAAGTTAGGCTCATTTTCTCCTCGAGCAGAACGACTGTTAACCATGAGCAGCAGAGGATTGATCAGGACTGACAGATCTCTGCAATCTTCAAGGGATGGAACTGAGAAGTTGATCCAACCCCAGTGGAGAAGGTGA 1671 0.4219 MGKTPGKWIRNLFSGKKSSKSNPSSKRNIFKPSSNQDVLVPSEASVPNIPVDSSLISPPTAGANAAKEVHSEKVVVSGSSNDMNSLSAEVEETDAQAVVDSGSLDDAEKIRLAQAAVKAQAAFRGYQARRVFQTLKGVIQLQALIRGHLVRRQAVSTLYCVNRIVKVQALVRGRKVRHSDIGIAVLKICKDTKCSNPIGGVVTTMQAEKLSESVFVLKLLASSSSTVPLHINFDPGEPNFAWKWLERWTRSHFWAPLPKSKKKLDLKSDERSASCQPHDNKKGKGKRNAQKAPGVKIDGGSSSDSNKPKQHPKKVSSHPMQSSQEHSQKEIKNNIKKSSAQSVSSRSEVATEKRKHITGKVLGHNVTDAPEHGPSVSAEKVKNMGMSKSNQSDVEKSLGQQAEGEYGESNGNPITDLQTSVNNGKEEVIGGATEELNSNVNPKNSLRRASLPANFNNQDNGAHNTPRLPSYMAPTESAKAKLRAQGSPRFASDLVDKNGITRRLSLSSSLNGKLGSFSPRAERLLTMSSRGLIRTDRSLQSSRDGTEKLIQPQWRR 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1687 556 Pfam Protein of unknown function (DUF4005) 457 529 IPR025064 -
Dere09g1687 556 SMART iq_5 134 155 IPR000048 GO:0005515
Dere09g1687 556 SMART iq_5 111 133 IPR000048 GO:0005515
Dere09g1687 556 MobiDBLite consensus disorder prediction 14 38 - -
Dere09g1687 556 Pfam IQ calmodulin-binding motif 114 133 IPR000048 GO:0005515
Dere09g1687 556 Pfam IQ calmodulin-binding motif 136 153 IPR000048 GO:0005515
Dere09g1687 556 PANTHER IQ-DOMAIN 5-RELATED 1 508 - -
Dere09g1687 556 MobiDBLite consensus disorder prediction 535 556 - -
Dere09g1687 556 MobiDBLite consensus disorder prediction 382 419 - -
Dere09g1687 556 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Dere09g1687 556 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Dere09g1687 556 MobiDBLite consensus disorder prediction 1 38 - -
Dere09g1687 556 MobiDBLite consensus disorder prediction 261 283 - -
Dere09g1687 556 MobiDBLite consensus disorder prediction 315 347 - -
Dere09g1687 556 Gene3D - 109 159 - -
Dere09g1687 556 MobiDBLite consensus disorder prediction 261 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1687 Dere-ChrDere09 21648265 21652679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1687 1 556 IQD Protein Family AT2G02790 35.948 1.44e-84 273