LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere09g1685	ATGAAATTTTTCTGGGTTTCTCTGTTTTGCTTGTACCCTGCAATCATTTTTGTTCTGCTTGCTCCAATTTCAAGATCACAAATAACCCCAAGCGAGAGCAGAATTCTTCTCAAGGTTCAAAAGTTTCTTGAATATCCTCAGGTTCTTCAAGGATGGAGGAACTGGACCAGCTTCTGTTATCTCCCTCCATCACCTTCTCTCAAGATTGTCTGCTCTAACAGCCATGTAACCGAATTAACCATTATTGGAAACAAGGTCTCATCATCTGCTCAAACTCTTTCAGAAAGATTCTCCATTGATTCTTTCTTCACTGTCTTGACAAAGCTTTCTAGTTTGAAGGTACTGTCACTAGTTTCTTTGGGTTTGTGGGGTCCTTTACCAGCCAAGATAGACAGGTTCTGGTCACTTGAAGTGCTGAACATTAGCTCAAATTTCATCTATGGGGAAATCCCATCATCAATCTCTTCTCTGAAAAATCTCAGGAGTCTGGTTTTGGCTGATAATTTGTTCAATGGCAGCGTCCCAGATCTGGGAGCACTAGCTTCTCTTGAAGAGCTTAATCTGGGTGGCAACAAACTGGGTCCTGAATTGCCTTCATTGGGGAACAATCTTGTGAGAATTGTCCTGAAAAACAATTCTTTTAGGTTTCAGATTCCGCCCCCAATCATGCATTTTCAAAAACTTCAAGAATTTGACATCTCTTCCAACAAATTTTCTGGAACCATCCCATCCTCTCTGTTTTCTTTGCCTTCCATTTTCTACATAAACTTAGCTGGAAACCAACTCACTGGCGGTTTCTTAGTGAACATAAACTGTAGTCCAAAGCTAACATTTGTGGATATCTCACACAACCTTTTGATGGGAAAATGGCCACCTTGTATTGGATCAAAGTCGTCAAATCTCACTGTATTGTATGCTGGGAATTGTTTTTCAACCAGAAACTTGAATGGCCAGCTCCAACATCCACCTTCATATTGCGAGGAAGAGAAAGCATTAGCCGTTAATCCTATACAGAGAAACCAGGTGAAGGAGTCAGGTATGAGACTTATTGTAGTGATTGGAGTTATTGGAGGTTCTGTTGGACTTGCAGTGCTCCTGTCACTGCTCATTCTATTTATGTGGAGGAAGTGCAAAGCAGAAAGAGCAGATGGCAAAGTTCTAGACAAATCTGCTGATCGAAAATCCCTAAGACCAAATATTAATACAAGACGTGTTCCCCAGACAATGAGGTTATCTGCACTTGGAATCCCACCATACCGAATTTTCACATTAGAGGAAATTGAAGATGCAACAAACAACTTTGATTCATCAAATCTAATAGGAGAAGTATCTCAAGGACAGTTATATAAAGGTAGGGTCAGAGATGGTTCAGTGGTCCTGGTCAACTGTGTAGAAATAATGCACAAGAACTTGCCCCAAAGCCTAATGCAGCACATGGAGGTATTACCCAATTTGAGGCATAGGCATTTGGTTAGTGTTCTAGGACATTGTGTCATTACCACTCAGGACCATTCCCAACCAAGAAGCAAAGTCTTCATTGTTTTTGAACACATCTCAAATGGGTCATTGAGGGATCATCTTTCAGATTTGAGAAAGAAGCAAGTACTGAAATGGCCACAGAGAATGGCAATCTCCATAGGCATTGCAAGAGGAACCCAGTTCTTGCACACAGGAGTTGTTCCTGGCATGTTTGGCAACAATTTAAAGATTGAGAACATTTTGCTGGATGATAATCTCAACCCAAAAGTTAGTGGATATAACCTTCCATTGCCATATAAGAATGGTTTTGAGAGCACGCTTCTTCAACGAACTGGCCCCAATCATGTTGGCGGAAACAATAAAGCGGAAACGGAAGATATCTATCAATTGGGTGTTATACTACTTGAAGTTATCACTGGCAAACAACTCACATCCGCCAGTGAAATTGAGGAGCTGAGGGATGAGCTGGAAAGAGGTTTATCAGAGGTAGCATCAGTTCTGAGAACTGCAGCGGATCCATCAATCCAGGGAACTTATGCATATGAATCACTGAGAACTGCAGTTCAAATCACAATCAATTGTCTATGCAAAGTTCCTAGTAAGCGACCTTCAATAGAGGATGTTCTTTGGAATTTGCAGTATTCAATACAAGTGCAAGAGTCGTGGACTAGCAGTGGAAACCTCAGTACTAAATTTTAG	2178	0.4105	MKFFWVSLFCLYPAIIFVLLAPISRSQITPSESRILLKVQKFLEYPQVLQGWRNWTSFCYLPPSPSLKIVCSNSHVTELTIIGNKVSSSAQTLSERFSIDSFFTVLTKLSSLKVLSLVSLGLWGPLPAKIDRFWSLEVLNISSNFIYGEIPSSISSLKNLRSLVLADNLFNGSVPDLGALASLEELNLGGNKLGPELPSLGNNLVRIVLKNNSFRFQIPPPIMHFQKLQEFDISSNKFSGTIPSSLFSLPSIFYINLAGNQLTGGFLVNINCSPKLTFVDISHNLLMGKWPPCIGSKSSNLTVLYAGNCFSTRNLNGQLQHPPSYCEEEKALAVNPIQRNQVKESGMRLIVVIGVIGGSVGLAVLLSLLILFMWRKCKAERADGKVLDKSADRKSLRPNINTRRVPQTMRLSALGIPPYRIFTLEEIEDATNNFDSSNLIGEVSQGQLYKGRVRDGSVVLVNCVEIMHKNLPQSLMQHMEVLPNLRHRHLVSVLGHCVITTQDHSQPRSKVFIVFEHISNGSLRDHLSDLRKKQVLKWPQRMAISIGIARGTQFLHTGVVPGMFGNNLKIENILLDDNLNPKVSGYNLPLPYKNGFESTLLQRTGPNHVGGNNKAETEDIYQLGVILLEVITGKQLTSASEIEELRDELERGLSEVASVLRTAADPSIQGTYAYESLRTAVQITINCLCKVPSKRPSIEDVLWNLQYSIQVQESWTSSGNLSTKF	725

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere09g1685	725	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	345	714	-	-
	Dere09g1685	725	SUPERFAMILY	L domain-like	42	321	-	-
	Dere09g1685	725	FunFam	Probable LRR receptor-like serine/threonine-protein kinase At2g02780	29	202	-	-
	Dere09g1685	725	Gene3D	Phosphorylase Kinase; domain 1	399	505	-	-
	Dere09g1685	725	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	518	721	-	-
	Dere09g1685	725	ProSiteProfiles	Protein kinase domain profile.	434	709	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere09g1685	725	Gene3D	Ribonuclease Inhibitor	200	347	IPR032675	-
	Dere09g1685	725	Pfam	Leucine Rich Repeat	135	157	IPR001611	GO:0005515
	Dere09g1685	725	Pfam	Protein kinase domain	437	702	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere09g1685	725	Coils	Coil	642	662	-	-
	Dere09g1685	725	Pfam	Leucine rich repeat	203	262	IPR001611	GO:0005515
	Dere09g1685	725	Coils	Coil	722	725	-	-
	Dere09g1685	725	Gene3D	Transferase(Phosphotransferase) domain 1	518	720	-	-
	Dere09g1685	725	SUPERFAMILY	Protein kinase-like (PK-like)	412	705	IPR011009	-
	Dere09g1685	725	Gene3D	Ribonuclease Inhibitor	29	199	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere09g1685	Dere-ChrDere09	21639333	21642964	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere09g1685	24	640	Miscellaneous Gene Families	AT2G02780	50.312	0.0	551

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VI-1	Dere09g1685		Pkinase	1.9e-18	CL0016