Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1682 ATGCAGGAGGAGGATCAAAAGCTAATTGAATCAGCAAAGGGGAAAATGGGAGAAGTTAGAGAAGAAAATGAAACGTTGAAAGTACTATTGGCACAGCTTCTGAAGGAGTACGAATCGCTTCAAATGCATTTCTATGACATCCTTCGACAAGATCATCATAATCATCAACAAGAAGACGAAGAGGCGACCAAAGCTACAACAGGCACAGCAGATCACAGCCCTAACATTGATGACAACACGAATGAACAAAATGAGCTTGTCTCTCTTTCTTTAGGGCTTTTATCTAAAGGTTCAATTAAGGATGATGAGAATTACAAAATTAGCAATACAAGTATTAAAGAGAATGAGAAGAATATGGGAGAAGGACTAGCACTAGGGCTAGACGTCAGATTTGATCCTGATTCAGGTGAAGTTGAAGGTACAAATATTGTAAGCATTGAAGGTAGCTCTGATGAGGAAGGGAAGGAAGAGGAAGCCACTGAGATATGGCCACCCAGTAGGGTTCTCAAGACAATGAGAAGTGGGGATAATACTACTGAAGCTCCTCAACAAGCTCAGCTCAAGAAAGCTAGGGTTTCTATCCGAGCCAGATGTGATGCTCAAACGATGAACGATGGATGTCAATGGAGAAAATATGGACAGAAAATAGCAAAAGGGAATCCATATTGCCCGCGGGCATACTACAGATGCACTGTTTCACCATCTTGTCGAGTGAAAAAACAGGTGCAAAGATGTGCAGAGGACACTTCTATCTTGATAACCACGTATGAAGGAACCCACAATCATCCACTTCCGATCTCAGCCACACCTATGGCTTCTACAACATCTGTGGCTGCTTCCATGTTTCAATCTCCCTCCTCTTTCACAGTCACCTCCCAATCCAATCATTCTCCTTCTTCACAGCACACAGCCCCCATCTTCAACTCATCCATTCTTCCTCTTAATTATAGCTTCAATAATGCCCTAACTAACTTCTCTTCCTCTTCCATGTCAAGACCACTGCATCAGCACTTCTATTTCCCCAACACTTCCATTTCCACCTGCAATTCCCACCCCACAATCACTCTCGATCTCACTTCACTACCACCATCCTCCTCTCATCATCAGTTCAGAAAATTCACCTCCTCTGGCTTCTCTGTCATACCAAGTTATAATAGTAATTCACAATCTCCTTCACCATCTTCCTCTTACTATAATGGTGGTAGTTATTTCAATAACTATGGGAATGGGACACTACTACCCCACATGAACAGAAACCAAAGTAGTGGGAAACAACCATTTGTTCAGCAGCAGGCATTACAAGAAGAGCCAATTGCAGCTGCAACAAAAGCAATCACCACCAATCCTAAGTTTCAAACAGCAATTGCAGCTGCACTCACCTCCTACGTAGGTGGTACTAATACTAATAATAATGGAGGCGTTGGTAGCTTTTACAGTCCTTCTTGCTCAAATAAAAATGCCATAGACTGCACTGGGTCATCATCGAGGTATATGATGAACTATAATATGTCTTCTTCTTCTGGTGTCAATAATGCTCAACAAGGAAGCTTAATATTATTTCCACCACTACCAGCAGCGTCTAGAAATGCATCTGGCTCTGTTTCTTCGGATAGAAGTAACCAGATCCTAGAGCACTGGAAGGGGAAGAATTTGACCATCGCTCCAAAGGATTCAAACCTCTGA 1683 0.4236 MQEEDQKLIESAKGKMGEVREENETLKVLLAQLLKEYESLQMHFYDILRQDHHNHQQEDEEATKATTGTADHSPNIDDNTNEQNELVSLSLGLLSKGSIKDDENYKISNTSIKENEKNMGEGLALGLDVRFDPDSGEVEGTNIVSIEGSSDEEGKEEEATEIWPPSRVLKTMRSGDNTTEAPQQAQLKKARVSIRARCDAQTMNDGCQWRKYGQKIAKGNPYCPRAYYRCTVSPSCRVKKQVQRCAEDTSILITTYEGTHNHPLPISATPMASTTSVAASMFQSPSSFTVTSQSNHSPSSQHTAPIFNSSILPLNYSFNNALTNFSSSSMSRPLHQHFYFPNTSISTCNSHPTITLDLTSLPPSSSHHQFRKFTSSGFSVIPSYNSNSQSPSPSSSYYNGGSYFNNYGNGTLLPHMNRNQSSGKQPFVQQQALQEEPIAAATKAITTNPKFQTAIAAALTSYVGGTNTNNNGGVGSFYSPSCSNKNAIDCTGSSSRYMMNYNMSSSSGVNNAQQGSLILFPPLPAASRNASGSVSSDRSNQILEHWKGKNLTIAPKDSNL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1682 560 Coils Coil 16 43 - -
Dere09g1682 560 MobiDBLite consensus disorder prediction 1 21 - -
Dere09g1682 560 Pfam WRKY DNA -binding domain 204 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere09g1682 560 ProSiteProfiles WRKY domain profile. 198 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere09g1682 560 Gene3D WRKY domain 188 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere09g1682 560 SUPERFAMILY WRKY DNA-binding domain 196 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere09g1682 560 MobiDBLite consensus disorder prediction 67 81 - -
Dere09g1682 560 FunFam probable WRKY transcription factor 31 188 266 - -
Dere09g1682 560 MobiDBLite consensus disorder prediction 53 81 - -
Dere09g1682 560 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 7 471 IPR044810 GO:0003700
Dere09g1682 560 SMART WRKY_cls 203 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1682 Dere-ChrDere09 21621172 21624363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1682 16 479 WRKY Transcription Factor Family AT5G15130 38.247 9.39e-72 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere09g1682 WRKY 3.9e-22 CL0274