Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1642 ATGTTTATTCATGAACTAGTCAGGCTTGTTCCATCTGGATGCAGTCTCAGGAATACAGAGTACATTGTTAGGGTTGTTATTTTTACTGGACATGAAACCAAGGTGACGATGAATACCATGACTATTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTTGACAAGCTCATACTTGCTCTATTTGTGACTCTCTTTGTAGTGTGTTTACTTGGAGCCATAAGCAGTGGCATCTTCGTAGACGAAAGTATTTCTACCTACGTCTTGATGCAGGTTATCACTTTGACTATGTTTACCCACATCACTTTATACTCAACAATCATCCCCATTTCGCTTTATGCGTTGATAGAGGTGGAATACATCTTCTCTGACAAAACTGGGACTCTAACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATTGGAGGAGAGGTTTATGGTAATGGCATCACTGAAATTGAGAGGGGAATAGCTGAGCACAGTGGCATTAAAATTCAGGAAAATAGATCAGCGAATGCTGTGCAAGAAAGGGGTTTTAATTTTGATGATACCAGGCTTATGAGAGGTGCCTGGAGGAATAAGCCTAACCCAAATTATTGCAAGGTAGCTAAGTCTTGTGAAGGGCCATTACTATTTCTTACTTTCAGGAAGAGAAGTTTATTCATCTTTTTGTCGCCCTATGGCAGCATGACTTCTTTATACTTCTAA 705 0.3957 MFIHELVRLVPSGCSLRNTEYIVRVVIFTGHETKVTMNTMTIPSKRSTLERKLDKLILALFVTLFVVCLLGAISSGIFVDESISTYVLMQVITLTMFTHITLYSTIIPISLYALIEVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGITEIERGIAEHSGIKIQENRSANAVQERGFNFDDTRLMRGAWRNKPNPNYCKVAKSCEGPLLFLTFRKRSLFIFLSPYGSMTSLYF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1642 234 FunFam Phospholipid-transporting ATPase IC 118 130 - -
Dere09g1642 234 SUPERFAMILY Calcium ATPase, transmembrane domain M 40 118 IPR023298 -
Dere09g1642 234 ProSitePatterns E1-E2 ATPases phosphorylation site. 123 129 IPR018303 -
Dere09g1642 234 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 116 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1642 Dere-ChrDere09 20995993 21002769 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1642 8 205 Primary Pumps ATPases AT1G59820 51.613 2.10e-72 237