Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1641 ATGTCTCCGGAAGGCGACGTCGTTTCGTCTACTCCGGGAGGCTTCAGTGAAGAAGCTTATCTAATTCTACATTTGAAGCAAAGAATTCTGAAAGAAATAAATAACACTCCAATGGCTGTGGCTGAGTTGACCGTTGGACTTGATGATCGTGTTAAAGAACTGATGAAATTGTTAGATGTGAAATCCAATGGTTTAAAAGTATTGGGATTATTTGGGATGGGTGGAATTGGTAAGACAACCCTTGCCAAGAGTCTCTTCAACAACCTCGTTGCTCATTTTGAGCGTCGCAGCTTCATTTCAGATGTCAGGGAAGCTTCTTCAACAATGGAAGGTTTAATATGTCTTCAAAATAAGCTTTCTAGTCATCTTTCCTCGGTATCAGTGGCTTCTGTGAATGATATCAACGATGGTGTTGACACAATTAGAAGGATAGTTAAACAAAACAAAGTTCTGGTTGTCTTAGATGATGTTAGTGATGTAAAGCAGCTTCATTTTCTGATTGGTAATAGGGAATGGCTTCATAATGGTAGCCGTATTATAATCACCACAAGGGATAAACATGTCTTACCTGAGATTTATGTGAAGAGTAATGAACTCTATGAGGTTAAGGAATTGCAGTTCCCTGAAGCACTTGAATTATTCAGCTACCATGCACTGAGAAGAAAGGAACCTGCAGAGAACCTTGTGAATCTATCAAATGAAATTGTGTCTCTGACAGGAGGATTACCTTTGGCTTTGGAAGGAACAAGATATATCGAAGGGATTGTTCTGGATTTTACAAAGAAAAGAATGTATATGCCGAGTGATCGCCGTGCTGATGAAATTACCTGGGATCACTTTCGACAAAAGCCCAGTTGTAATTCTGCATCAGCATACGTGAAAGAAAGGTACAAGAAATATGTCGACGATCGAGCAGAGAAAGCACGAAGGTTGAAATTTCAGACAAAGCACTTCCAGCCATTGGTTGGCTTGAGACTTCTTCAAATCAATTATTCGAGATTGGAAGGAAAATTCAGATGCCTTCCTCCGGGATTAAAGTGGTTACAATGGAAACAATGTCCATTAAGAAATATTCCTTCCGACTCCATTCCTTCAGAACTTGCTGTGCTTGATCTATCCGAAAGCCACATCGAAACAGTGTGGGGCAGGCATAGGAATAAGGTGTGCGAGAACCTAATGGTTTTGAATCTCTCCAGTTGCAGCAGTTTGAAAGCAATTCCTGATTTAACTGGGTATTCATCTCTAGAAAAGATTGATCTAGGGTCATGCAGTAATTTAAGTAAGATTCATGAATCTATTGGGAATTTGAGCTCATTAGTCCACTTGAACATGCGTAATTGCATGAACCTTCTTGGATTACCCAGTGATGTCTCCAGGCTGAAACATCTTGAGAGCCTTGTTCTTTCTGGTTGCAGCAAATTGGAAGCACTACCAAAGGACATAAGCTGCATGGTCTCTTTAAGACAACTTCTTGTTGATGACACTGCCATAAGTGAGCTACCTGAATCCATTTTCCACCTCACAAAACTTCAAAAATTGAGTGCTTATCGTTGCCATTCACTGAAGAGGCTTCCCACCTGCATCGGGAAACTAAGCTCTTTGCTTGAGTTATCTCTTGACCATACTGCATTGGAGGAATTGCCTGATTCTATTGGGTCATTGAAAAACCTTGTGAAGCTTGGCTTGATGGGGTGTAAATCTCTGACTATGATTCCTGATTCTGTTGGGAAACTAGAATCATTGACACGATTGCTTTTAAATGGAAGTGGGATTATGGAGTTGCCTGCTTCCATCGGCTCCTTATCATATTTAAGGGACTTGACTCTTGGTGACTGCATGCTGCTTGTCAAATTGCCTGAATCTATAGAAGCATTGGTTTCTATTTCCGAGCTTCAGTTAGATGGGACATCAATCACCAGTTTGCCAGATAGCATTGGGGGCATGAAAATGCTAACAAAGCTTGAGATGAGAAATTGTGAGCATCTTAGATTTCTGCCTGCAACAATTGGAAGCTTGTCAGCTCTTACAACATTGGACACGTATAATTCTAACATCACTGAGTTGCCAGAATCAATAGGGATGTTAGAAAATCTCGTCTGGATTAGATTAGACATGTGCAGACAGCTTCGAAAGCTTCCGGATTCCCTGGGAAACCTAAAATCTTTGTGTCAGTTACTGATGAAAGAAACAGCTATTACACGACTACCTGATAGCTTTGGGATGCTTTCAAGCTTGGTAGTTTTAGACATGGAAAGAAGGCCTTATCTTAACATGGCTGGAAACTTGTCTAGAACGGCTGATGCTTTAGTTCCTAGCGGACAAGAAGAATCTAATTCAACTGCAATTCTAACTTCTTTCTGTAGTTTAACCTTGCTAGAAGAGTTGAATGCTCATGGCTGGAGAATATACGAGGAGCTGAATCTCATAAATTGCAAAGAAGTGGCTGATATTCCGGGTCTCGAACATATGAAGACCTTGAAAAGACTGTACATGAATGGTTGCCATGGATGTTCCTCCGCTGTAAAGAAAAGGTTTTCCAAGTTCTGTATTATCATGTTTCATGTCTTCAATGTTCGTCACTTACTGAAGATTTTATCACAGGTTCTGATGAAAAATTTAGAGATTTTGATCATGCCTGGAAGCAAAATCCCAGATTGGTTTTCAGGAGAAGTAGTACGCTTTTCCAAGCAGAGAAACCGTCAGCTCTGGGGTGTCATTTTTGGTGGGGTGCTTTCTTTCAATAACATACTTGAAAACGAACTAGCTGACCTGCAATTGTTGGATGTTAAAGCAATGATCCACAACTCGACTGATGTTGTATATAAAACAACGTTTCGCCTGCTAGGAATACCTAGGACAAACGAAGATCACATTTTTTTGCGCCGGTTTAGAGATGAACATCCATTGGTTATTCAGGTAAAAGATGGATATAAATTGCAATTGACAAAACAAGACCCAGCCTACGTTCGAGGGCTTGAGCTGAAAAAATGTGGAATTTATCTAGTCTTTGAAGGCGATGATGATTATCAAGGAGATGAAGGATCGCTGGACGAAGGGCAGCATTCTATTTCACATAGGTTATCGAAGTTCTTTAATACTGTGTGA 3105 0.4039 MSPEGDVVSSTPGGFSEEAYLILHLKQRILKEINNTPMAVAELTVGLDDRVKELMKLLDVKSNGLKVLGLFGMGGIGKTTLAKSLFNNLVAHFERRSFISDVREASSTMEGLICLQNKLSSHLSSVSVASVNDINDGVDTIRRIVKQNKVLVVLDDVSDVKQLHFLIGNREWLHNGSRIIITTRDKHVLPEIYVKSNELYEVKELQFPEALELFSYHALRRKEPAENLVNLSNEIVSLTGGLPLALEGTRYIEGIVLDFTKKRMYMPSDRRADEITWDHFRQKPSCNSASAYVKERYKKYVDDRAEKARRLKFQTKHFQPLVGLRLLQINYSRLEGKFRCLPPGLKWLQWKQCPLRNIPSDSIPSELAVLDLSESHIETVWGRHRNKVCENLMVLNLSSCSSLKAIPDLTGYSSLEKIDLGSCSNLSKIHESIGNLSSLVHLNMRNCMNLLGLPSDVSRLKHLESLVLSGCSKLEALPKDISCMVSLRQLLVDDTAISELPESIFHLTKLQKLSAYRCHSLKRLPTCIGKLSSLLELSLDHTALEELPDSIGSLKNLVKLGLMGCKSLTMIPDSVGKLESLTRLLLNGSGIMELPASIGSLSYLRDLTLGDCMLLVKLPESIEALVSISELQLDGTSITSLPDSIGGMKMLTKLEMRNCEHLRFLPATIGSLSALTTLDTYNSNITELPESIGMLENLVWIRLDMCRQLRKLPDSLGNLKSLCQLLMKETAITRLPDSFGMLSSLVVLDMERRPYLNMAGNLSRTADALVPSGQEESNSTAILTSFCSLTLLEELNAHGWRIYEELNLINCKEVADIPGLEHMKTLKRLYMNGCHGCSSAVKKRFSKFCIIMFHVFNVRHLLKILSQVLMKNLEILIMPGSKIPDWFSGEVVRFSKQRNRQLWGVIFGGVLSFNNILENELADLQLLDVKAMIHNSTDVVYKTTFRLLGIPRTNEDHIFLRRFRDEHPLVIQVKDGYKLQLTKQDPAYVRGLELKKCGIYLVFEGDDDYQGDEGSLDEGQHSISHRLSKFFNTV 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1641 1034 SUPERFAMILY L domain-like 322 641 - -
Dere09g1641 1034 Gene3D Ribonuclease Inhibitor 628 848 IPR032675 -
Dere09g1641 1034 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 498 586 IPR039203 GO:0050832
Dere09g1641 1034 PRINTS Disease resistance protein signature 67 82 - -
Dere09g1641 1034 PRINTS Disease resistance protein signature 239 253 - -
Dere09g1641 1034 PRINTS Disease resistance protein signature 144 158 - -
Dere09g1641 1034 PRINTS Disease resistance protein signature 458 474 - -
Dere09g1641 1034 Gene3D - 26 197 IPR027417 -
Dere09g1641 1034 Gene3D Ribonuclease Inhibitor 302 625 IPR032675 -
Dere09g1641 1034 SMART LRR_typ_2 531 554 IPR003591 -
Dere09g1641 1034 SMART LRR_typ_2 672 695 IPR003591 -
Dere09g1641 1034 SMART LRR_typ_2 625 648 IPR003591 -
Dere09g1641 1034 SMART LRR_typ_2 484 507 IPR003591 -
Dere09g1641 1034 SMART LRR_typ_2 578 601 IPR003591 -
Dere09g1641 1034 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 247 IPR027417 -
Dere09g1641 1034 Pfam NB-ARC domain 49 247 IPR002182 GO:0043531
Dere09g1641 1034 SUPERFAMILY L domain-like 562 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1641 Dere-ChrDere09 20976233 20982293 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1641 471 772 WRKY Transcription Factor Family AT4G12020 28.707 7.51e-11 64.7