Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1639 ATGGTGCCGGACGGCGACGTCGTTTCGTCGACTCCGGGAACCTTCAGGCTCCGGTGGGATGTGTTCTTGAGCTTCAGAGGCGCGGACACCCGCGACTCCTTCGTTGAACATCTCTACGACGCGCTCCAATCTCGTGGCGTTCGAGTTTTCCTCGACGACGGCGGATTGGATCGCGGGGACGAGATCGCACCGAGTCTTCTGGAAGCCATCGATGACTCGGCCGCTTCCATTGTCGTCCTCTCACCCAACTATGCTTATTCTCATAGTTGTCTCGAGAAGCTGGCCAAGATTTGCGACTGCCGGAGACTGATTCTGCCGATGTTCTACCACGTCGACCCAGCGGAAGTCCGGAAACAGAAGGGTCCCTTTGAAGAACATTTCAAGATCCACGAAAACAGATTTGGGAAAGAGACAGTGATCAAGTGGAGAGAAGCTATGAAAAAAGTCGTGTTTGTTCGTGTTTCCTACAGTGAAGAAGCCCGTCTAATTCTCCATTTGATGCAAATAATTCTGAAAGAACTAAGTAACACTCCAGTGGGTGTGGCTGAGTTGACCGTTGGACTTGATGATCGTGTTGAAGAACTGATGAAATTGTTAGATGTGAAATCCAGTGGTTTAAGAGTATTGGGATTATTTGGGATGGGTGGAATTGATGTCAGGGAAGCTTCTTCTACAGTGGAAGGTTTAATATCTCTTCAAAATAAGCTTTCTAATAATCTTTCCTCGGTATCAGTGGCTTCTGTGAATGATATCAACGATGGTGTTGACACAATTAGAAGGATAGTTAAACAAAACAAAGTTCTGGTTGTCTTAGATGATGTTAGTGATGTAAAGCAGCTTCATTTTCTGATTGGTAATAGGGAATGGCTTCATAATGGTAGCCGTATTATAATCACCACAAGGGACAAACAAGTTTTACCTGAGAGTTATGTGAGGAGTAATGAGCTCTATGAGGTTAAGGAATTGAAGTTCTCTGAGGCACTTGAATTATTCAGCTACCATGCGCTGAGAAGAAAGGAACCTACAGAGAACTTTTTGAATCTATCAAACCAAATTGTGTCTCTGACAGGAGGATTACCTTTGGCTTTGGAAAAGGGAGTTAGAATTCTTTTTCTTTTGGCTCATGGTGACTCCGTCGTGTTCTGTGTTAGTGGTCAGTATGGGGGCGGAACAGGATGTATCGAAGGGATTGTTCTAGATTTCAGAAAGAAAAGTAAAATTACGCCGAGAGATCGCCATGCTGATGAAATTATCTGTGATTACTTTCGACAGAAGCCCAGTTGTAATTCTGCGTCAGCATACGTGAAAGAAAGGTACAAGAGATATGTCGATGATCGAGCAGAGAAAGCAAGAACGTTCAAATTTCGGACGGAGCATTTCCAGCCAATGGTGTGTGAGAAATTAATGGCTTTGAATCTCTCCAGTTGCAGCAGATTGAGAGCAATTCCTGATTTAACTGGGTATTCATCTCTAGAAAAAATTAGTCTAGAGTTATGCAGTAATTTAAGTAAGATTCATGACTCTATTGGGAATTTGAACTCATTAGTCCACTTGAACATGCTTAATTGCATGAACCTTCTTGAATTACCCAGTGATGTCTCCGGGCTGAAACGTCTTGAGAGCCTTGTTCTTTCTGGTTGCAGCAAATTGAGAGCACTACCAAAGGACATGAGCTGCATGGTCTCATTAAGACAACTTCTTGTTGATGGCACCGCCATAAGTGAGCTACCTGAGTCCATTTTCGACCTCACAAAACTTGAAAAATTGAGTGCTTATAGTTGCTATTCACTGAAGAGGCTTCCCTCCTGCATTGGAAAACGAAGCTCTTTGCTGGAGTTGTCTCTTGACCACACAGCATTGGAGGAATTGCCTGATTCTATTGGGTCTTTGAAAAACCTTGTGAGGCTTGGCTTGATGGGGTGTACATCTCTCACCGTGATTCCTGATTCTGTTGGGAAACTAGAATCATTGACACAATTGCTTTTGAATAGAAGTGGAATTAAAGAGTTGCCTGCTTCCATCGGCTCCTTATCATATTTAAGGGACCTGACTGTTGGTGACTGCAAGCTGCTTGTCAAATTGCCTGAATCAATAGAAGCATTGGCTTCTATTTCTATGCTTCAGTTAGATGGGACATCAATCACCAGTTTGCCAGATGGCATTGGGGGCATGAAAATGCTAACAAAACTGGAGATGAGAAATTGTGAGCATCTTAGACTTCTGCCTGCAAGAATTGAATTCTGTTCAGCTCTTACAACATTGGATATGTATAAATCTAACATCACTGAATTGCCAGAATCAATAGGGATGTTGGAAAATCTTGTCCGGTTTAGATTAGACATGTGCAAACAGCTCCGAAAGCTTCCGGATTCCCTGGGAAACCTAAAATCTTTGCGTCAGTTACTGATGAAAGAAACAGCTATTACACGACTACCTGACAGCTTTGGGATGCTTTCAAGTTTGGTAGTTTTAGACATGGAAAGAAGGCCTTATCTTAACATGACTGGAAACTTGTCTAGAACGGCTGATGCTTTCGTTCCTAGCGGACAAGAAGAACCTAATTCAACTGCAATTCTAACTTCTTTCTGTAGTCTAACCTTGCTAGAAGAGTTGAATGCTCATGGCTGGAGAATATACGGTAAAGTTCCTGATGATTTTGAAAAGCTTTCATCACTAGAGACTTTGAATCTTGGCCAGAATAATATTTGCAGTCTTCCGGCCATCATGAATGGCCTCTCCTGTCTGAAAGTGCTTTTGTTGTCAGATTGTAGGGAGCTCAGATTTCTCCCTCCTCTTCCCTCTAGCTTAATAGAGGTGAATGTTGCAAATTGTACTGCGTTACAATGTATATCTGATATATCAAACTTGGAGTTCTTAGAGGAGCTAAATCTCATAAATTGCGAAAAAGTGGCTGATGTTCCAGGTCTCGAACATTTGAAGTCCTTGAAAAGATTGTACATGAATGGTTGCCATGGATGTTCCTCCGCTGTAAACAAAAGGTTTTCCAAGGTTCTGATGAAAAATCTAGATATTTTGGTCATGCCCGGAAGCAAAATCCCAGATTGGTTTTCAGGAGAAGTAGTTCGCTTTTCCAAGCGGAGGAACCGCCAGCTCCGGAGGATCATTTGTGGTGGTGTGCTCTCTTTCAACAACATACCCCAAAACCAACGAGATGGCCTGCAGTTGTTGGATGTTCAAGCAATGATCCTCAACTTGACTGATGTTGTATTTAGAACGACTTTTCGCCTGCTGGGAATACCTAGGACAAACGAAGATCACATTTTTTTGCGCCTGTTTAGAGATGAACATCCATTGGTTTCTCAGGTAAAAGATGGATATACATTGCAATTGACAAAGCGAGACCCACCCTACGTTCCAGGGCTTGAGCTGAAAAAATGTGGAATTTATCTAGTCTTTGAAGGCGAGGATGATTATCACGGAGATGAAGGATCGCTGGATGAAGGGCAGCATTCTATTTCGCATAAATTATCAGAGTTCTTCAATACTGTGTGA 3513 0.427 MVPDGDVVSSTPGTFRLRWDVFLSFRGADTRDSFVEHLYDALQSRGVRVFLDDGGLDRGDEIAPSLLEAIDDSAASIVVLSPNYAYSHSCLEKLAKICDCRRLILPMFYHVDPAEVRKQKGPFEEHFKIHENRFGKETVIKWREAMKKVVFVRVSYSEEARLILHLMQIILKELSNTPVGVAELTVGLDDRVEELMKLLDVKSSGLRVLGLFGMGGIDVREASSTVEGLISLQNKLSNNLSSVSVASVNDINDGVDTIRRIVKQNKVLVVLDDVSDVKQLHFLIGNREWLHNGSRIIITTRDKQVLPESYVRSNELYEVKELKFSEALELFSYHALRRKEPTENFLNLSNQIVSLTGGLPLALEKGVRILFLLAHGDSVVFCVSGQYGGGTGCIEGIVLDFRKKSKITPRDRHADEIICDYFRQKPSCNSASAYVKERYKRYVDDRAEKARTFKFRTEHFQPMVCEKLMALNLSSCSRLRAIPDLTGYSSLEKISLELCSNLSKIHDSIGNLNSLVHLNMLNCMNLLELPSDVSGLKRLESLVLSGCSKLRALPKDMSCMVSLRQLLVDGTAISELPESIFDLTKLEKLSAYSCYSLKRLPSCIGKRSSLLELSLDHTALEELPDSIGSLKNLVRLGLMGCTSLTVIPDSVGKLESLTQLLLNRSGIKELPASIGSLSYLRDLTVGDCKLLVKLPESIEALASISMLQLDGTSITSLPDGIGGMKMLTKLEMRNCEHLRLLPARIEFCSALTTLDMYKSNITELPESIGMLENLVRFRLDMCKQLRKLPDSLGNLKSLRQLLMKETAITRLPDSFGMLSSLVVLDMERRPYLNMTGNLSRTADAFVPSGQEEPNSTAILTSFCSLTLLEELNAHGWRIYGKVPDDFEKLSSLETLNLGQNNICSLPAIMNGLSCLKVLLLSDCRELRFLPPLPSSLIEVNVANCTALQCISDISNLEFLEELNLINCEKVADVPGLEHLKSLKRLYMNGCHGCSSAVNKRFSKVLMKNLDILVMPGSKIPDWFSGEVVRFSKRRNRQLRRIICGGVLSFNNIPQNQRDGLQLLDVQAMILNLTDVVFRTTFRLLGIPRTNEDHIFLRLFRDEHPLVSQVKDGYTLQLTKRDPPYVPGLELKKCGIYLVFEGEDDYHGDEGSLDEGQHSISHKLSEFFNTV 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1639 1170 SUPERFAMILY L domain-like 693 1017 - -
Dere09g1639 1170 SUPERFAMILY L domain-like 464 741 - -
Dere09g1639 1170 SMART LRR_typ_2 608 630 IPR003591 -
Dere09g1639 1170 SMART LRR_typ_2 560 583 IPR003591 -
Dere09g1639 1170 SMART LRR_typ_2 654 677 IPR003591 -
Dere09g1639 1170 SMART LRR_typ_2 795 817 IPR003591 -
Dere09g1639 1170 SMART LRR_typ_2 701 724 IPR003591 -
Dere09g1639 1170 SMART LRR_typ_2 889 912 IPR003591 -
Dere09g1639 1170 Gene3D Ribonuclease Inhibitor 741 935 IPR032675 -
Dere09g1639 1170 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 149 IPR035897 -
Dere09g1639 1170 ProSiteProfiles TIR domain profile. 17 178 IPR000157 GO:0007165
Dere09g1639 1170 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 460 602 IPR044974 GO:0006952
Dere09g1639 1170 Gene3D - 217 313 IPR027417 -
Dere09g1639 1170 Gene3D Ribonuclease Inhibitor 446 740 IPR032675 -
Dere09g1639 1170 Gene3D Ribonuclease Inhibitor 936 1012 IPR032675 -
Dere09g1639 1170 Pfam NB-ARC domain 233 364 IPR002182 GO:0043531
Dere09g1639 1170 PRINTS Disease resistance protein signature 356 370 - -
Dere09g1639 1170 PRINTS Disease resistance protein signature 534 550 - -
Dere09g1639 1170 PRINTS Disease resistance protein signature 208 223 - -
Dere09g1639 1170 ProSiteProfiles Leucine-rich repeat profile. 891 912 IPR001611 GO:0005515
Dere09g1639 1170 Pfam TIR domain 19 177 IPR000157 GO:0007165
Dere09g1639 1170 Gene3D - 15 181 IPR035897 -
Dere09g1639 1170 SMART till_3 18 152 IPR000157 GO:0007165
Dere09g1639 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 368 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1639 Dere-ChrDere09 20938722 20947459 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1639 631 821 WRKY Transcription Factor Family AT4G12020 30.366 1.43e-08 57.4